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FluoRender

FluoRender is an interactive rendering tool for confocal microscopy data visualization. It combines the renderings of multi-channel volume data and polygon mesh data, where the properties of each dataset can be adjusted independently and quickly. The tool is designed especially for neurobiologists, and it helps them better visualize the fluorescent-stained confocal samples.

Research Team:
Yong Wan, Ph.D student
Scientific Computing and Imaging Institute, University of Utah

Hideo Otsuna, Ph.D
Dept. Neurobiology & Anatomy, University of Utah

Chi-Bin Chien
Dept. Neurobiology & Anatomy, University of Utah

Chuck Hansen
Scientific Computing and Imaging Institute, University of Utah

Date: 02/24/10
Size: 14 items
User Interface

User Interface

User Interface (v2.2)

Render View

Render View

Render View (v2.2)

Clipping Plane Usage

Clipping Plane Usage

Clipping Plane Usage in Detail

Zebrafish - Eye

Zebrafish - Eye

Zebrafish - 4ch_0.5

Zebrafish - 4ch_0.5

Zebrafish - 4ch

Zebrafish - 4ch

Zebrafish - 20xTail_inside

Zebrafish - 20xTail_inside

Zebrafish - 40xTail

Zebrafish - 40xTail

Zebrafish - Head_20x

Zebrafish - Head_20x

Basic Operations

Basic Operations

Here we show the basic operations of our confocal visualization tool.

Groups and Composite Mode

Groups and Composite Mode

This video demos how to use groups in the composite mode of FluoRender.

4 Dimensional Reconstruction

4 Dimensional Reconstruction

This time lapse volume rendering shows the development of the eye of the zebrafish embryo.

 
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