Designed especially for neurobiologists, FluoRender is an interactive tool for multi-channel fluorescence microscopy data visualization and analysis.
Large scale visualization on the Powerwall.
BrainStimulator is a set of networks that are used in SCIRun to perform simulations of brain stimulation such as transcranial direct current stimulation (tDCS) and magnetic transcranial stimulation (TMS).
Developing software tools for science has always been a central vision of the SCI Institute.
Jet [Yet] Mante

Jet [Yet] Mante - Graduate Research Assistant

WEB 3720
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advisor Dr. Orly Alter and Dr. Chris Myers

Background

I read Natural Sciences at the University of Cambridge specializing in my final year in plant sciences. My research project was "Quantifying Promoter Element Activation in Marchantia polymorpha Gemmae" which involved fluorescence microscopy and programming in python. The project was conducted in the Haseloff Lab (http://www.haseloff-lab.org/). Professor Nik Cunniffe supervised my literature review on Coupling Landscape-Scale Epidemic Models to Models of Atmospheric Dispersion.

Previous work includes using symbolic regression to study factors influencing antibody production in hamster ovarian cells (Dr. Duygu Dikicioglu - Department of Chemical Engineering and Biotechnology Cambridge) and the use of infrared spectroscopy for patent ductus arteriosis diagnostics (Dr. Valerie Chock - Stanford University School of Medicine; https://www.nature.com/articles/pr2016148).

Current Responsibilities

Currently I am completing rotations in both the Alter and Myer labs.

Research Interests

  • Biological modelling
  • Bioengineering
  • Genetic Circuits
  • Computational Biology
  • Interdisciplinary Science