EMBC Workshop 2102 Meeting, August 2, 2012
==========================================

1) Review agenda for workshop

    8:30    8:45  Introduction    Rob MacLeod
    8:45    9:00  Case Study I: Image based analysis of patients with       
		  atrial fibrillation Rob
    9:00    9:15  Demo I: Seg3D Demo and tutorial Rob  & Ayla
    9:15    10:00 Lab I: Segmentation with Seg3D  
    10:00   10:15 Break I 
    10:15   10:30 Case Study II:  Visual Comparison of Deep Brain Stimulation 
		  Parameters  Tom 
    10:30   10:45 Demo II: ImageVis3D/map3d demo and tutorial     Tom  & James 
    10:45   11:30 Lab II: Visualization with ImageVis3D and map3d 
    11:30   11:45 Case Study III: Statistical Shape Modeling in 
		  Orthopedics       Manasi 
    11:45   12:00 Demo III: ShapeWorks demo and tutorial  Liz & Manasi
    12:00   12:45 Lab III: Shapeworks     
    12:45   13:45 Lunch   
    13:45   14:00 Case Study IV: Geometric Modeling of the heart and head 
		  Rob  and Moritz 
    14:00   14:15 Demo IV: BioMesh3D demo and tutorial    Moritz & Sehymus 
    14:15   15:00 Lab IV: Mesh generation with BioMesh3D  
    15:00   15:15 Break II        
    15:15   15:30 Case Study V: Simulation of brain potentials from 
		  transcranial stimulation      Rob/Moritz
    15:30   15:45 Demo V: SCIRun demo and tutorial        Moritz  & Sehymus 
    15:45   16:30 Lab V: Simulation with SCIRun   
    16:30   16:40 Summary and Wrap Up     Rob MacLeod
    16:40   17:25 Open Lab        

2) Logistics
   - EMBC contact is Lukrecija Lelong, l.lelong@ieee.org.
   - Registration for us
   - Registration for participants 
   - EMBC contact: Lukrecija Lelong,  l.lelong@ieee.org

3) Web site
   - http://www.sci.utah.edu/cibcwksp2012-home.html
   - Check this during the meeting and make list of suggestions

4) Promotions
   - Text sent to previous workshop participants:

    Workshop on Image Based Modeling, Simulation, and Visualization

    Add to your educational value of the EMBC 2012 by attending this workshop
    on techniques and open source software that provides a complete
    computational pipeline for subject specific modeling and simulation! 

    Target audience: biomedical engineers interesting in using computational
    tools to support research and development across a broad application
    spectrum.   

    Workshop goals: to use lectures, demos, and hands-on experience to learn
    about a complete computational pipeline including: 1) visualization and
    segmentation of three-dimensional image based data sets; 2) shape analysis
    of anatomical structures from image data; 3) construction of polygonal
    models of surfaces and volumes from these images for subsequent analysis,
    visualization of measured data, simulation, or other forms of computation;
    and 4) simulation of bioelectric fields that arise in electrocardiology and
    neuroelectricity.  Each participant will receive a complete set of binary
    executables, source code, demo data, and documentation for all elements of
    the pipeline software.   

    Presenters:  member of the Center for Integrated Biomedical Computing
    (CIBC) will staff the workshop, present demos, help answer questions during
    the labs, and discuss research applications with users.   

    Prerequisites: participants should bring a laptop of at least moderate
    capacity and up to date operating system (Windows or OSX) and graphics-card
    drivers. While participants are encouraged to bring their own data, we will
    provide examples for use during the workshop.  

    More information: visit http://www.sci.utah.edu/cibcwksp2012-home.html.  

    We look forward to seeing you there!

    Rob MacLeod (macleod@sci.utah.edu)
    Dana Brooks (brooks@ece.neu.edu)

   - How else to promote?

5) Status on various components
   - Seg3D (Rob, Ayla)
   - ImageVis3D (Tom and James)
   - Shapeworks (Liz and Manasi)
   - Modeling (Rob and Moritz)
   - Simulation (Rob and Moritz)