Directory Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain/

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jeroen 2006-05-15 11:34 Rev.: 34229

Adding a different stimulus model

436 lines of code changed in 5 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddBlockStimulus.cc (del), DMDAddStimulus.cc (new 215), DMDAddStimulusSeries.cc (new 221), sub.mk (changed)

jeroen 2006-05-08 17:08 Rev.: 34169

Merge my algorithms from the ModelCreation package to Core/Algorithms so they are available for everyone. I added four directories to Core/Algorithms: Math for mathematical operations (mirrors Math in module tree), this currently has the FE code, Fields: my version of the field algorithms, these contain new ones and old ones with bug fixes to get my CardioWave stuff to work, Converter: Converter algorithms a series of converters to deal with conversion between Matrices, Nrrds and Fields, DataIO: gui less version for writing and reading in SCIRun files using PersistentIO or the Plug-ins. All the algorithms are grouped into libraries with one main header file: Algorithms/Math/MathAlgo.h Algorithms/Fields/FieldsAlgo.h Algorithms/DataIO/DataIOAlgo.h Algorithms/Converter/ConverterAlgo.h. Each library needs to be initialised with the ProgressReporter after which all the dynamic compilation is hidden from the user. I put all the algorithms in a separate namespace call SCIRunAlgo to avoid possible conflicts between class names. Similarly all the dynamic files will start with the word ALGO, to avoid duplication of filenames created by the current set of modules. --Jeroen

147 lines of code changed in 10 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddBlockStimulus.cc (new 136), DMDAddMembrane.cc (new), DMDAddReference.cc (+2 -2), DMDConductionVelocity.cc (+2 -2), DMDCreateSimulation.cc (new), sub.mk (+3 -3)

jeroen 2006-05-01 01:23 Rev.: 34057

Interface modules for continuous bidomain

18 lines of code changed in 4 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddBlockStimulus.cc (+4 -1), DMDAddMembrane.cc (+1 -3), DMDAddReference.cc (+4), DMDCreateSimulation.cc (+9 -4)

jeroen 2006-04-28 23:04 Rev.: 34052

bug fixes

6 lines of code changed in 1 file:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddMembrane.cc (+6)

jeroen 2006-04-27 00:27 Rev.: 34033

Adding a module to compute conduction velocity

148 lines of code changed in 4 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDBuildSimulation.cc (new), DMDConductionVelocity.cc (+146), sub.mk (+1)

jeroen 2006-04-15 23:28 Rev.: 33876

bug fixes

174 lines of code changed in 6 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddBlockStimulus.cc (+20 -8), DMDAddMembrane.cc (+34 -13), DMDAddReference.cc (+20 -8), DMDBuildSimulation.cc (+3 -3), DMDCreateSimulation.cc (+96 -44), sub.mk (+1 -1)

jeroen 2006-04-14 09:52 Rev.: 33862

Part 1 of CardioWave interface

589 lines of code changed in 7 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddMembrane.cc (+3 -6), DMDBuildSimulation.cc (+76), DMDCreateDomain.cc (new), DMDCreateSimulation.cc (+475), DMDCreateSimulator.cc (del), sub.mk (+2 -1)

jeroen 2006-04-11 09:34 Rev.: 33822

Updates to various modules

3 lines of code changed in 1 file:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDCreateDomain.cc (+3 -2)

jeroen 2006-04-08 15:53 Rev.: 33809

update to most recent version

176 lines of code changed in 4 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddBlockStimulus.cc (+60 -151), DMDAddMembrane.cc (+39 -93), DMDAddReference.cc (+62 -79), DMDCreateDomain.cc (+15 -37)

jeroen 2006-03-24 14:34 Rev.: 33636

Updates to work with new Module class

20 lines of code changed in 3 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddBlockStimulus.cc (+11 -11), DMDAddReference.cc (+8 -8), sub.mk (+1 -1)

dav 2006-03-22 21:17 Rev.: 33600

Two things coming on it commit:

1) Dataflow/Ports was moved into Dataflow/Network/Ports

- Fixed the sub.mk files to not use libDataflow_Ports as it is now part of
libDataflow_Network. Cleaned many of the sub.mk files up so that
libraries were only listed once.

- I've only tested these changes on the main Packages... I visually
inspected the others, don't know for sure if I got everything.

2) Clean up of Uintah problems from the large commit Marty made earlier

- continue to use getID() for patches.

- another commit is coming shortly to continue the fixes for Uintah

5 lines of code changed in 2 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddMembrane.cc (+3 -3), DMDCreateDomain.cc (+2 -2)

mjc 2006-03-22 16:42 Rev.: 33591

add with-tetgen option to configure, Make Module.h conform to the coding standard, and all the massive fallout from renaming variables and slots in that class

24 lines of code changed in 4 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddBlockStimulus.cc (+5 -5), DMDAddMembrane.cc (+14 -14), DMDAddReference.cc (+2 -2), DMDCreateDomain.cc (+3 -3)

jeroen 2006-03-22 10:16 Rev.: 33585

Sync with latest developments

484 lines of code changed in 4 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddBlockStimulus.cc (+267), DMDAddMembrane.cc (+18 -10), DMDAddReference.cc (+197), sub.mk (+2)

jeroen 2006-03-06 14:05 Rev.: 33418

First check-in of part of the new modules to do discrete multidomain

501 lines of code changed in 4 files:

• Packages/CardioWave/Dataflow/Modules/DiscreteMultiDomain: DMDAddMembrane.cc (+309), DMDCreateDomain.cc (+105), DMDCreateSimulator.cc (new 50), sub.mk (+37)