Directory Packages/Uintah/CCA/Components/Models/Radiation/

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guilkey 2006-10-16 12:34 Rev.: 35594

Change SUBMINOR == 1 to SUBMINOR >= 1

0 lines of code changed in 2 files:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_PetscSolver.cc (new)

worthen 2006-06-02 15:23 Rev.: 34405

Prep configure to run under cygwin. Not quite ready yet.

Windows port of Uintah. Currently does not support Arches or Radiation (due to lack of fortran).

30 lines of code changed in 6 files:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_CellInformation.cc (new), Models_DORadiationModel.cc (new), sub.mk (new)

jas 2006-05-08 12:44 Rev.: 34155

Use PCFactorSetFill instead of PCILUSetFill for petsc-2.3.1.

6 lines of code changed in 1 file:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_PetscSolver.cc (+6)

worthen 2006-05-08 11:52 Rev.: 34152

Only 'create' a new PerProc patchset when necessary, and not just whenever called

1 lines of code changed in 2 files:

• Packages/Uintah/CCA/Components/Models/Radiation: RadiationDriver.cc (+1 -1)

borodai 2006-05-03 14:00 Rev.: 34110

Petsc solver cleanup for radiation. Results seem to deviate
too fast for hypre and petsc

104 lines of code changed in 9 files:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_HypreSolver.cc (new), Models_HypreSolver.h (+8 -14), Models_PetscSolver.cc (+40 -149), Models_PetscSolver.h (+47 -51), Models_RadiationSolver.h (-2)

harman 2006-04-21 14:49 Rev.: 33956

fixed typo

4 lines of code changed in 1 file:

• Packages/Uintah/CCA/Components/Models/Radiation: RadiationDriver.cc (+4 -3)

dav 2006-04-18 17:55 Rev.: 33903

These are fixes for correctly handling Uintah Geometry Objects.
However, there was a lot of clean up necessary in this effort so those
files are also included.

GeometryPieces are now stored in Handles so that we don't have to
explicitly delete them. Therefore many delete's have been removed,
and most "GeometryPiece *"s have been replaced with "GeometryPieceP"s.

ShellGeometryPieces aren't 100% yet, but they will be soon. (I don't
think anyone is actually using them.)

Instead of having the names of the GeometryPieces just used as strings
in the Factory file, I've placed the name in the .cc file of each
GeometryPiece. It can be referenced by using <TheClass>::TYPE_NAME or
theObject->getType();

The GeometryPiece::setName() function now sets a flag that specifies
that the name has been set. This is necessary so that when the piece
is output to a file, it will display the piece's name. Therefor the
setName() function is not used inside any of the GeometryPiece
classes.

The outputProblemSpec() function will now label the objects in
addition to outputing them. It will also only output a reference to
them on 2nd and subsequent references. It has been moved into the
GeometryPiece() file and uses outputHelper() from each subclass to
output the subclasses data.

OutputProblemSpec() and clone() are now const functions. Note,
however, that outputProblemSpec() does modify the firstOutput_
variable. (It is 'mutable'.)

M Core/Exceptions/AssertionFailed.h

Turn off SGI STL warnings.

M Core/Geometry/Point.h
M Core/Geometry/Vector.cc
M Core/Geometry/Vector.h
M Core/Geometry/Point.cc

Use x_ (etc) instead of _x. This matches our standard, avoids
potential conflicts with compilers use of _<something> variables, and
cleans up a bunch of strangely formatted warning messages on the newer
gcc's.

M Packages/Uintah/CCA/Components/Models/test/Mixing.cc
M Packages/Uintah/CCA/Components/Models/test/Mixing.h

GeometryPiece fixes. Cleaned up compiler warnings.

M Packages/Uintah/CCA/Components/Models/test/PassiveScalar.cc
M Packages/Uintah/CCA/Components/Models/test/PassiveScalar.h
M Packages/Uintah/CCA/Components/Models/test/flameSheet_rxn.cc
M Packages/Uintah/CCA/Components/Models/test/flameSheet_rxn.h
M Packages/Uintah/CCA/Components/Models/test/AdiabaticTable.cc
M Packages/Uintah/CCA/Components/Models/test/AdiabaticTable.h
M Packages/Uintah/CCA/Components/Models/test/SimpleRxn.cc
M Packages/Uintah/CCA/Components/Models/test/SimpleRxn.h

GeometryPiece fixes. Compiler warning cleanup. Untabify, indention,
etc. Initialize possibly uninitialized variables.

M Packages/Uintah/CCA/Components/Models/test/NonAdiabaticTable.cc
M Packages/Uintah/CCA/Components/Models/test/NonAdiabaticTable.h
M Packages/Uintah/CCA/Components/Models/Radiation/RadiationDriver.cc
M Packages/Uintah/CCA/Components/Models/Radiation/RadiationDriver.h
M Packages/Uintah/CCA/Components/MPM/ConstitutiveModel/MPMMaterial.cc
M Packages/Uintah/CCA/Components/MPM/ConstitutiveModel/MPMMaterial.h
M Packages/Uintah/CCA/Components/MPM/Contact/SpecifiedBodyContact.cc
M Packages/Uintah/CCA/Components/MPM/ParticleCreator/ShellParticleCreator.cc
M Packages/Uintah/CCA/Components/MPM/ParticleCreator/ParticleCreator.cc
M Packages/Uintah/CCA/Components/MPM/ParticleCreator/ParticleCreator.h
M Packages/Uintah/CCA/Components/MPM/ParticleCreator/MembraneParticleCreator.cc
M Packages/Uintah/CCA/Components/ICE/ICEMaterial.cc
M Packages/Uintah/CCA/Components/Arches/BoundaryCondition.cc
M Packages/Uintah/CCA/Components/Arches/ScaleSimilarityModel.cc
M Packages/Uintah/CCA/Components/Arches/BoundaryCondition.h
M Packages/Uintah/CCA/Components/Examples/RegionDB.h
M Packages/Uintah/CCA/Components/Examples/BoundaryConditions.cc
M Packages/Uintah/CCA/Components/Examples/BoundaryConditions.h
M Packages/Uintah/CCA/Components/Examples/RegionDB.cc
M Packages/Uintah/StandAlone/inputs/SMPMICE/test_guv.ups
M Packages/Uintah/StandAlone/inputs/MPMICE/mpmice.srn
M Packages/Uintah/StandAlone/inputs/MPMICE/diw.ups
M Packages/Uintah/StandAlone/slb.cc
M Packages/Uintah/Core/GeometryPiece/NullGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/NaaBoxGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/SmoothCylGeomPiece.cc
M Packages/Uintah/Core/GeometryPiece/SmoothCylGeomPiece.h
M Packages/Uintah/Core/GeometryPiece/ConeGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/CorrugEdgeGeomPiece.h
M Packages/Uintah/Core/GeometryPiece/GUVSphereShellPiece.h
M Packages/Uintah/Core/GeometryPiece/SphereGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/UnionGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/BoxGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/DifferenceGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/SphereMembraneGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/TriGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/SphereMembraneGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/GeometryObject.h
M Packages/Uintah/Core/GeometryPiece/SphereShellPiece.cc
M Packages/Uintah/Core/GeometryPiece/ShellGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/NaaBoxGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/IntersectionGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/ShellGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/GeometryPieceFactory.h
M Packages/Uintah/Core/GeometryPiece/CylinderGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/PlaneShellPiece.cc
M Packages/Uintah/Core/GeometryPiece/CylinderGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/NullGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/PlaneShellPiece.h
M Packages/Uintah/Core/GeometryPiece/GeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/FileGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/GeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/FileGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/CorrugEdgeGeomPiece.cc
M Packages/Uintah/Core/GeometryPiece/GUVSphereShellPiece.cc
M Packages/Uintah/Core/GeometryPiece/CylinderShellPiece.cc
M Packages/Uintah/Core/GeometryPiece/ConeGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/SphereGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/CylinderShellPiece.h
M Packages/Uintah/Core/GeometryPiece/BoxGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/ShellGeometryFactory.cc
M Packages/Uintah/Core/GeometryPiece/DifferenceGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/UnionGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/ShellGeometryFactory.h
M Packages/Uintah/Core/GeometryPiece/TriGeometryPiece.h
M Packages/Uintah/Core/GeometryPiece/GeometryObject.cc
M Packages/Uintah/Core/GeometryPiece/SphereShellPiece.h
M Packages/Uintah/Core/GeometryPiece/SmoothGeomPiece.cc
M Packages/Uintah/Core/GeometryPiece/UniformGrid.h
M Packages/Uintah/Core/GeometryPiece/IntersectionGeometryPiece.cc
M Packages/Uintah/Core/GeometryPiece/SmoothGeomPiece.h
M Packages/Uintah/Core/Grid/Grid.h
M Packages/Uintah/Core/Grid/BoundaryConditions/BoundCondReader.cc
M Packages/Uintah/Core/Grid/BoundaryConditions/RectangleBCData.cc
M Packages/Uintah/Core/Grid/BoundaryConditions/BCDataArray.cc
M Packages/Uintah/Core/ProblemSpec/ProblemSpec.h
M Packages/Uintah/Core/Util/Handle.h
M Packages/Uintah/Core/Util/RefCounted.cc
M Packages/Uintah/Core/Util/RefCounted.h

M Packages/Uintah/CCA/Components/ProblemSpecification/ProblemSpecReader.cc

Don't use single letter variable names if they are going to be used
outside of a small loop. Fixed compiler warning.

M Packages/Uintah/Core/GeometryPiece/GeometryPieceFactory.cc

Massive changes. Removed hardcoding of object type names. Storing a
map of GeometryPiece Handles instead of pointers (to solve memory
issues (ie: freeing of pointers twice). Handle the case when an xml
element has data in it, but no children. Added more debug output.

M Packages/Uintah/Core/Grid/Grid.h
M Packages/Uintah/Core/Util/RefCounted.h

Copy constructor was never actually implemented (or used).

11 lines of code changed in 3 files:

• Packages/Uintah/CCA/Components/Models/Radiation: RadiationDriver.cc (+6 -6), RadiationDriver.h (new)

borodai 2006-04-17 19:41 Rev.: 33893

Spherical harmonics radiation model and weighted sum of grey gases property
model for radiation do not pass 0th order verification. They do not run
in parallel (they crash). Thus, they have been disabled.
Patchmean property model option runs, but shows difference between 1 and 8 processor
run after 2.5 sec. on 10^3 case, so users are warned. In contrast, discrete
ordinats with radcoef (default options, only ones left) results compare
just fine for 10 seconds in this case.

7 lines of code changed in 1 file:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_DORadiationModel.cc (+7)

borodai 2006-04-17 12:58 Rev.: 33882

As it stands now, computeCO2_H2_from_f is a duplicate
parameter, completely opposite to useTableValues. So,
computeCO2_H2_from_f was removed to awoid confusion and
example input files has been changed accordingly.

12 lines of code changed in 2 files:

• Packages/Uintah/CCA/Components/Models/Radiation: RadiationDriver.cc (+12 -9), RadiationDriver.h (-1)

borodai 2006-04-17 10:49 Rev.: 33880

Well, afte removing bracket, puting O back is needed.

1 lines of code changed in 1 file:

• Packages/Uintah/CCA/Components/Models/Radiation: RadiationDriver.cc (+1 -1)

harman 2006-04-14 13:32 Rev.: 33864

turned off some debugging code that was accidentally left on.

1 lines of code changed in 1 file:

• Packages/Uintah/CCA/Components/Models/Radiation: RadiationDriver.cc (+1 -1)

borodai 2006-04-14 12:03 Rev.: 33863

Removed erroneous bracket.

1 lines of code changed in 1 file:

• Packages/Uintah/CCA/Components/Models/Radiation: RadiationDriver.cc (+1 -1)

jas 2006-03-24 15:33 Rev.: 33640

Reorder the arguments for VecAXPY for petsc 2.3.0.

2 lines of code changed in 1 file:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_PetscSolver.cc (+2 -2)

dav 2006-03-22 21:32 Rev.: 33602

More Updates to fix getID() problems and to address the move of Dataflow/Ports

7 lines of code changed in 2 files:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_PetscSolver.cc (+1 -1), RadiationDriver.cc (+6 -6)

mjc 2006-03-22 16:42 Rev.: 33591

add with-tetgen option to configure, Make Module.h conform to the coding standard, and all the massive fallout from renaming variables and slots in that class

7 lines of code changed in 2 files:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_PetscSolver.cc (+1 -1), RadiationDriver.cc (+6 -6)

jas 2006-03-16 19:20 Rev.: 33535

Conditional compilation based on the PETSC_VERSION_MINOR id. One can install
either petsc 2.2 or petsc 2.3.

12 lines of code changed in 1 file:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_PetscSolver.cc (+12 -1)

dav 2006-02-16 18:50 Rev.: 33291

Major update:
------------
Simplified the (XML) calls appendElement() and appendChild() by
removing the embedded newline and tab parameters. The XML outputer
(libxml2) will indent things properly without them. Also cleaned up
the ProblemSpec.cc file to remove the appendText() call which was
commented out and thus not doing anything.

Minor updates:
-------------
In some files placed the function return type on a separate line.

In StandAlone, sus requires Core/Datatypes (because of a circular
dependency that will be removed soon... however, this allows sus to
run on the SGI's for now).

Removed extra ";" from the end of MMS class constructors.

Added field name to ScalarMinMax (which I only partially checked in before).

Some restructuring of CompareMMS.cc, but it is not functional yet.

30 lines of code changed in 4 files:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_DORadiationModel.cc (+5 -9), Models_HypreSolver.cc (+6 -6), Models_PetscSolver.cc (+9 -10), RadiationDriver.cc (+10 -12)

harman 2006-02-03 13:27 Rev.: 33154

so it compiles without petsc.

0 lines of code changed in 2 files:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_FakePetscSolver.cc (new)

jas 2006-02-03 11:53 Rev.: 33150

Write out the problemSpecification for various pieces of a material that are
needed for restarting.

113 lines of code changed in 12 files:

• Packages/Uintah/CCA/Components/Models/Radiation: Models_DORadiationModel.cc (+21 -5), Models_DORadiationModel.h (+4 -1), Models_HypreSolver.cc (+15), Models_HypreSolver.h (+2), Models_PetscSolver.cc (+21), Models_PetscSolver.h (+2), Models_RadiationModel.h (+2), Models_RadiationSolver.h (+2), RadiationDriver.cc (+42 -1), RadiationDriver.h (+2)