July 2008 Commit Log

Number of Commits:
197
Number of Active Developers:
9
jthornoc 2008-07-31 16:50 Rev.: 41796

Cleaned up some unused MMS stuff.

3 lines of code changed in 4 files:

sshankar 2008-07-31 13:54 Rev.: 41792

udaReaderMTMD.xml for generating the makefile

8 lines of code changed in 1 file:

harman 2008-07-31 12:33 Rev.: 41787

moved -maxdepth option to the beginning of the find command.

1 lines of code changed in 1 file:

dav 2008-07-30 17:14 Rev.: 41777

ACML needs acml_mv.so. Added --with-mx flag (to handle myrinet stuff for mpi linking. Added MPI_EXTRA flags that both ofed and mx will use.

657 lines of code changed in 2 files:

dav 2008-07-30 16:11 Rev.: 41776

Add --with-acml (blas/lapack) flag.

621 lines of code changed in 2 files:

jas 2008-07-30 16:08 Rev.: 41775

Revert revision 41766 which deleted copy constructors and assignment operators.

0 lines of code changed in 12 files:

guilkey 2008-07-30 13:45 Rev.: 41773

Fixed some errors found by Scott Bardenhagen in the Gruneison EOS description.

2510 lines of code changed in 2 files:

luitjens 2008-07-30 09:35 Rev.: 41770

Set d_done by checking if the range between d_s and d_e is a valid iterator. This allows null iterators to be specified which will say the iterator is always in a done state.


0 lines of code changed in 4 files:

guilkey 2008-07-29 19:07 Rev.: 41768

Further satisfying my OCD affliction.

0 lines of code changed in 3 files:

guilkey 2008-07-29 19:06 Rev.: 41767

Formatting changes. I just couldn't take it anymore.

10 lines of code changed in 2 files:

jas 2008-07-29 18:24 Rev.: 41766

Remove some debugging code that was currently ifdef'd out.

0 lines of code changed in 6 files:

jas 2008-07-29 18:16 Rev.: 41765

Rename the boundary iterators to match the old way of iterating.

43 lines of code changed in 1 file:

jas 2008-07-29 17:07 Rev.: 41761

Fix the braces for the application of the pressure boundary conditions.

50 lines of code changed in 1 file:

harman 2008-07-29 16:43 Rev.: 41760

replaced all exit() statements with exceptions.

Large jobs should now exit gracefully instead of hanging.

39 lines of code changed in 7 files:

dav 2008-07-29 16:32 Rev.: 41759

Updated with delicate arch info. Perhaps a better blas test.

66 lines of code changed in 3 files:

dav 2008-07-29 15:26 Rev.: 41758

Some simple test code samples for trying to determine if blas/lapack exist.

135 lines of code changed in 3 files:

luitjens 2008-07-29 13:56 Rev.: 41755

Don't call reset() from begin() instead call reset when it is needed. Calling reset from begin could cause lots of unintended consequences.

146 lines of code changed in 18 files:

jas 2008-07-29 09:50 Rev.: 41752

Use the new Iterator framework for assigning boundary conditions.

142 lines of code changed in 42 files:

jas 2008-07-29 09:49 Rev.: 41751

Use the new Iterator framework for setting boundary conditions.

11 lines of code changed in 2 files:

jas 2008-07-29 09:48 Rev.: 41750

Use the new Iterator framework.

112 lines of code changed in 3 files:

jas 2008-07-29 09:46 Rev.: 41749

Use the new iterator framework instead of vector<IntVector>.

372 lines of code changed in 26 files:

jas 2008-07-29 09:45 Rev.: 41748

Print out the limits of the iterators.

Reset the index in each iterator when calling the begin().

36 lines of code changed in 11 files:

luitjens 2008-07-29 09:40 Rev.: 41747

MallocTrace profiling and minor indenting

26 lines of code changed in 3 files:

harman 2008-07-28 16:58 Rev.: 41742

Pruned the following unused labels
d_reactscalarVarSPLabel
d_fvtfiveINLabel
d_tfourINLabel
d_tfiveINLabel
d_tnineINLabel
d_qrgINLabel
d_qrsINLabel
d_stressSFCXdivLabel
d_stressSFCYdivLabel
d_stressSFCZdivLabel
d_stressCCXdivLabel
d_stressCCYdivLabel
d_stressCCZdivLabel
d_betaIJCompLabel
d_cbetaIJCompLabel
d_deltaCsLabel
d_velocityDivergenceBCLabel

55 lines of code changed in 1 file:

harman 2008-07-28 16:47 Rev.: 41741

Reformatted.

323 lines of code changed in 1 file:

harman 2008-07-28 16:14 Rev.: 41740

added tydef min_vartype

2 lines of code changed in 1 file:

luitjens 2008-07-28 15:58 Rev.: 41739

indentation

0 lines of code changed in 2 files:

luitjens 2008-07-28 15:30 Rev.: 41738

Tabs, spacing, etc

562 lines of code changed in 1 file:

guilkey 2008-07-25 12:28 Rev.: 41729

Formatting to make it a little easier to follow.

0 lines of code changed in 2 files:

guilkey 2008-07-24 11:58 Rev.: 41726

Removing some commented out junk.

3 lines of code changed in 1 file:

luitjens 2008-07-24 11:40 Rev.: 41725

Delete GhostOffsetVarmap. This class contained a map with a lot of entries. The entire class was redudant and not needed.


21 lines of code changed in 9 files:

luitjens 2008-07-24 09:21 Rev.: 41724

spacing

137 lines of code changed in 1 file:

luitjens 2008-07-24 09:16 Rev.: 41723

untabify and indent

43 lines of code changed in 1 file:

luitjens 2008-07-24 08:43 Rev.: 41722

MallocTrace Profiling

4 lines of code changed in 2 files:

guilkey 2008-07-23 18:05 Rev.: 41720

Remove options for fmpmice.

1 lines of code changed in 2 files:

sshankar 2008-07-23 17:35 Rev.: 41717

Removed sub.mk.old, readme.txt and particleData.h from uda2nrrd folder

0 lines of code changed in 3 files:

sshankar 2008-07-23 17:22 Rev.: 41716

Changed the reference(s) to header files

35 lines of code changed in 26 files:

dav 2008-07-23 16:48 Rev.: 41715

M configure.ac
M configure

Don't use tr1 hash_map stuff under OSX. OSX will find the gnu hash stuff
which seems to work just fine. Also, the current implementation of the
tr1 hashtable doesn't correctly respect returning a const_iterator from
the find() function and thus displays a really hard to read error (that says
that 'this' isn't const, and thus can't be used in a const function).
This problem occurs on both OSX Tiger and Leopard (using gcc 4.0.1).

2 lines of code changed in 2 files:

guilkey 2008-07-23 16:46 Rev.: 41714

FractureMPMICE, sadly, will probably never be realized. Cleaning calls
to the fracture code out of MPMICE and this allows me to clean up the
declarations of those in SerialMPM.h.

0 lines of code changed in 4 files:

guilkey 2008-07-23 16:00 Rev.: 41713

Remove the unused setBoundaryCondition method to help reduce future
confusion, there is enough in this code already.

2 lines of code changed in 3 files:

knolla 2008-07-23 14:44 Rev.: 41710

made a new uda2vis branch; restored uda2nrrd from rev 41567.

3710 lines of code changed in 34 files:

guilkey 2008-07-23 14:34 Rev.: 41709

Get rid of DefaultParticleCreator as it just makes calls to ParticleCreator.

0 lines of code changed in 6 files:

dav 2008-07-23 14:26 Rev.: 41707

At least for gcc 4.1.0, tr1 unordered_map (#defined for hash_map) does not have a default constructor, and thus we need to initialize it when it is created.

0 lines of code changed in 2 files:

luitjens 2008-07-23 14:19 Rev.: 41706

Changed the operator< to match the array3 layout.


5 lines of code changed in 7 files:

luitjens 2008-07-23 13:20 Rev.: 41704

Changed the listOfCells Iterator to return a sentinal for the end of the list as opposed to returning the last item in the list. This matches the behaviour of our other iterators and the behaviour of stl iterators

14 lines of code changed in 4 files:

luitjens 2008-07-23 12:48 Rev.: 41703

Hopefully the final compile fixes for tr1 set/map

4 lines of code changed in 6 files:

luitjens 2008-07-23 12:32 Rev.: 41701

This should be the correct way to add support for tr1 unordered_set and unordered_map.

Some things still don't compile because they don't have a default constructor.


5 lines of code changed in 2 files:

luitjens 2008-07-23 11:58 Rev.: 41699

Possible fixes for compile errors

3 lines of code changed in 1 file:

luitjens 2008-07-23 09:33 Rev.: 41696

MallocTrace profiling

2 lines of code changed in 1 file:

jas 2008-07-23 09:18 Rev.: 41695

Move clone() operation back to protected.

5 lines of code changed in 1 file:

luitjens 2008-07-23 08:55 Rev.: 41693

untabified and indented

360 lines of code changed in 1 file:

jas 2008-07-22 19:18 Rev.: 41689

Add the -mpi option if we are are using mpirun.

3 lines of code changed in 1 file:

jthornoc 2008-07-22 17:56 Rev.: 41688

Missed a variable change that Todd implemented.

2 lines of code changed in 1 file:

jthornoc 2008-07-22 17:49 Rev.: 41687

Restored original code. Will get to warnings once this passes RT.

78 lines of code changed in 1 file:

harman 2008-07-22 15:16 Rev.: 41682

gcc-4.3 compiler warnings.

3 lines of code changed in 1 file:

luitjens 2008-07-22 15:04 Rev.: 41681

Added support for std::tr1::unordered_set as a hash map (really quiets the gcc-4.3 warnings)

171 lines of code changed in 3 files:

harman 2008-07-22 14:55 Rev.: 41680

Jim3 has been moved to the parametric study branch

1 lines of code changed in 7 files:

luitjens 2008-07-22 13:32 Rev.: 41675

Avoid trunctation by sorting on center*2 instead of center

4 lines of code changed in 2 files:

guilkey 2008-07-21 18:56 Rev.: 41670

Add more digits to the output so that we can differentiate down in the
sub millisecond range.

6 lines of code changed in 1 file:

guilkey 2008-07-21 18:09 Rev.: 41669

Parameter study doesn't have vel_CC data, so don't compute KE of the product
gas.

1 lines of code changed in 1 file:

harman 2008-07-21 17:38 Rev.: 41668

removed Stencil.h -- not used

0 lines of code changed in 9 files:

guilkey 2008-07-21 17:28 Rev.: 41667

Adding a puda option for further analysis of the parameter
study data.

116 lines of code changed in 5 files:

qymeng 2008-07-21 17:18 Rev.: 41666

Added comments about a Zoltan undocumented parameter.

5 lines of code changed in 1 file:

qymeng 2008-07-21 16:11 Rev.: 41665

Added <zoltanIMBTol> tag in the input file for easy performance turning.
This can set the amount of imbalance Zoltan partitioning algorithm should deem acceptable.

for example:
<zoltanIMBTol> 1.05</zoltanIMBTol>
The value must be greater than 1.

4 lines of code changed in 2 files:

jas 2008-07-21 16:11 Rev.: 41664

Remove using namespace std; and replace with only what is needed.

123 lines of code changed in 97 files:

dav 2008-07-21 16:08 Rev.: 41663

Attempt to fix the problem with 'make' building executables twice.

3 lines of code changed in 1 file:

luitjens 2008-07-21 11:56 Rev.: 41657

added some mallocTrace code

3 lines of code changed in 1 file:

jas 2008-07-21 11:21 Rev.: 41654

Move default constructor to public interface.

0 lines of code changed in 2 files:

jas 2008-07-21 11:20 Rev.: 41653

Use scinew.

2 lines of code changed in 1 file:

jas 2008-07-21 11:20 Rev.: 41652

Use scinew.
Add reset() to copy constructor.

3 lines of code changed in 1 file:

jas 2008-07-21 11:18 Rev.: 41651

Use scinew.
Create default constructor.
Check for self in assingment operator.

10 lines of code changed in 1 file:

jas 2008-07-21 11:17 Rev.: 41650

Use scinew.

2 lines of code changed in 1 file:

jas 2008-07-21 11:17 Rev.: 41649

Move clone() to the public interface.

10 lines of code changed in 1 file:

jas 2008-07-21 10:33 Rev.: 41648

Add braces as suggested by compiler warning.

0 lines of code changed in 2 files:

jas 2008-07-21 10:05 Rev.: 41647

Use <backward/hash_set>.

4 lines of code changed in 1 file:

jas 2008-07-21 10:05 Rev.: 41646

Use <backward/hash_map>.

2 lines of code changed in 1 file:

jas 2008-07-21 10:03

Add missing includes for g++ 4.3 compiler.

0 lines of code changed in 6 files:

luitjens 2008-07-20 14:18 Rev.: 41640

Switched from PatchRangeTree to PatchBVH.


13 lines of code changed in 3 files:

luitjens 2008-07-20 13:53 Rev.: 41639

Unmerged 41637 and 41638. This code is much simpler and my assumption about invalidating iterators was wrong. The iterators are still valid they just point to different data. This is the behavior that i'm looking for.


29 lines of code changed in 8 files:

luitjens 2008-07-19 23:52 Rev.: 41638

Compile error

1 lines of code changed in 1 file:

luitjens 2008-07-19 23:50 Rev.: 41637

Don't pass around iterators as sort may invalidate iterators.

27 lines of code changed in 5 files:

luitjens 2008-07-19 23:19 Rev.: 41636

Handle the case where a zero sized patch list is passed into PatchBVH

11 lines of code changed in 1 file:

dav 2008-07-19 18:01 Rev.: 41629

Define CBLAS_H in all places that cblas.h is found.

17 lines of code changed in 2 files:

dav 2008-07-19 13:51 Rev.: 41627

Don't support Insight anymore in Uintah tree.

0 lines of code changed in 6 files:

jas 2008-07-19 05:08 Rev.: 41624

Add missing ';'.

0 lines of code changed in 2 files:

jas 2008-07-19 05:08 Rev.: 41623

Formatting change.

0 lines of code changed in 2 files:

jas 2008-07-19 05:06

Fix memory leaks.

76 lines of code changed in 5 files:

jthornoc 2008-07-18 18:30 Rev.: 41616

Fixed a missing curly-brace on an ambiguous "if" statement that was causing a warning.

35 lines of code changed in 1 file:

dav 2008-07-18 18:00 Rev.: 41613

Fix for LLNL uP machine.

1 lines of code changed in 1 file:

dav 2008-07-18 17:59 Rev.: 41612

Use correct #include formatting.

0 lines of code changed in 2 files:

dav 2008-07-18 17:45 Rev.: 41610

Deprecated GDCM stuff...

0 lines of code changed in 1 file:

dav 2008-07-18 17:43

Clean up indentation.

86 lines of code changed in 11 files:

dav 2008-07-18 17:31 Rev.: 41607


M configure.ac
M configure
M configVars.mk.in
M include/sci_defs/blas_testdefs.h.in
M Makefile.in
M aclocal.m4

* Added --with-mkl (mkl is a blas/lapack alternative) - for use on Ranger (and other places).
* Added --with-atlas help info (--with-atlas arg was already supported, but didn't show up on 'configure --help'.)

* Updated blas stuff to #include the correct cblas.h from include/sci_defs/blas_testdefs.h.in.

* Removed A LOT OF CRUFT that is nolonger used/supported in 1.25.4 (BioPSE, Insight, GDCM, etc.)

M include/sci_defs/mpi_testdefs.h.in

Use indentation... ;) ...it's your friend (or at least mine).

M include/sci_defs/teem_testdefs.h.in

Deprecated GDCM stuff.

D include/sci_defs/insight_testdefs.h.in
D scripts/mdk90.SCIRun.spec
D scripts/mdk90.Fusion.spec
D scripts/mdk92.Fusion.spec
D scripts/mdk92.SCIRun.spec
D scripts/babel_component_generic.mk
D scripts/babel_component.mk
D scripts/BioTensor
D scripts/BioImage
D scripts/rh90.SCIRun.spec
D scripts/rh90.Fusion.spec
D scripts/commit.py
D scripts/babel_component_f77.mk
D scripts/babel_component_c.mk
D scripts/BioFEM
D scripts/make-globus
D scripts/scijump
D scripts/rh80.Fusion.spec
D scripts/rh80.SCIRun.spec
D scripts/maintoin

Deleted files that are no longer supported/used in Uintah tree. The
*.spec files are for release RPMs that we won't be doing. BioTensor,
etc, are apps that, if you need them, should be found in the SCIRun
3.x. Other files are just not used.

M Core/Datatypes/DenseColMajMatrix.cc
M Core/Datatypes/DenseMatrix.cc

cblas.h (or it's equivalent) comes from include/sci_defs/blas_defs.h now.

1307 lines of code changed in 35 files:

dav 2008-07-18 16:37 Rev.: 41603

Use indention... it's your friend.

3 lines of code changed in 1 file:

dav 2008-07-18 16:35 Rev.: 41602

More linear ;) output.

1 lines of code changed in 1 file:

dav 2008-07-18 16:34 Rev.: 41601

More explicit ;) output.

1 lines of code changed in 1 file:

dav 2008-07-18 16:33 Rev.: 41600

Cosmetics.

11 lines of code changed in 1 file:

dav 2008-07-18 16:32 Rev.: 41599

cosmetic comments

2 lines of code changed in 1 file:

dav 2008-07-18 16:30 Rev.: 41598

Cleaner if layout.

6 lines of code changed in 1 file:

dav 2008-07-18 16:29 Rev.: 41597

Redstorm fix.

4 lines of code changed in 1 file:

dav 2008-07-18 16:28 Rev.: 41596

Fix destructor in the event the the developer is switching between cout and cerr for debug streams.

0 lines of code changed in 2 files:

harman 2008-07-18 13:57 Rev.: 41591

This should not change the answers

-global name change matlIndex -> indx
-minor formatting changes

1490 lines of code changed in 21 files:

luitjens 2008-07-18 13:25 Rev.: 41590

Implemented the corresponding versions for delete. This should stop the warnings we were getting about no corresponding operator if an exception is thrown.

32 lines of code changed in 1 file:

luitjens 2008-07-18 12:35 Rev.: 41589

Fixed a bug where if a zero volume region was queried a patch would still be returned

99 lines of code changed in 3 files:

luitjens 2008-07-18 11:36 Rev.: 41586

Fixed some compiler warnings. The majority of them were unused variables. In the case of unused variables I deleted them if they wern't referenced to in comments. If they were referenced in comments I commented them out.

Other fixes included braketing ifs and parenthesizing boolean statements.

34 lines of code changed in 17 files:

luitjens 2008-07-18 11:33 Rev.: 41585

Fixed a bug that was revealed via a compiler warning

0 lines of code changed in 2 files:

luitjens 2008-07-18 11:06 Rev.: 41583

Bracketed some if to remove ambiguities.


6 lines of code changed in 1 file:

luitjens 2008-07-18 10:55 Rev.: 41582

Removed some unused variables

2 lines of code changed in 3 files:

luitjens 2008-07-18 10:54 Rev.: 41581

Removed uda2nrrd build target

0 lines of code changed in 1 file:

luitjens 2008-07-18 10:37 Rev.: 41580

Check for <backward/hash_map>

This gets rid of a very annoying gcc-4.3 warning.

In the future we should probably add support for std::tr1::unordered_map as our hash map

59 lines of code changed in 3 files:

harman 2008-07-18 10:35 Rev.: 41579

no longer using lam

0 lines of code changed in 2 files:

harman 2008-07-18 10:34 Rev.: 41578

changed darwin configure to reflect changes in the system upgrade

2 lines of code changed in 1 file:

guilkey 2008-07-17 19:09 Rev.: 41575

O.K. this BETTER be the last time. Fix the
allocateAndPut labels for computeStressTensor.

10 lines of code changed in 1 file:

guilkey 2008-07-17 18:59 Rev.: 41574

Note to self. Test code before committing
changes. This at least runs past the first
timestep.

36 lines of code changed in 3 files:

guilkey 2008-07-17 18:24 Rev.: 41572

Added particleState for this model. This will hopefully fix the random
crashes in parallel runs.

14 lines of code changed in 2 files:

guilkey 2008-07-17 18:06 Rev.: 41571

Actually exit if the can't open file error is detected.

0 lines of code changed in 2 files:

sshankar 2008-07-17 17:43 Rev.: 41570

readme.txt for building the library

0 lines of code changed in 1 file:

sshankar 2008-07-17 17:35 Rev.: 41569

uda2nrrd library for VisIt

1219 lines of code changed in 12 files:

sshankar 2008-07-17 17:08 Rev.: 41568

uda reader plugin files for VisIt

2184 lines of code changed in 8 files:

luitjens 2008-07-17 16:14 Rev.: 41566

Comments

4 lines of code changed in 1 file:

dav 2008-07-17 15:00 Rev.: 41565

Make struct PatchKeyVal protected as Ranger compiler gives warning about it 'not really being visible' to subclasses that use it. Tiny bit of indention.

20 lines of code changed in 1 file:

luitjens 2008-07-17 14:51 Rev.: 41564

Some bug/compile fixes for PatchBVH

36 lines of code changed in 4 files:

dav 2008-07-17 14:16 Rev.: 41563

Fix OSX linking.

1 lines of code changed in 1 file:

luitjens 2008-07-17 12:00 Rev.: 41562

Added a Bounding Volume Hiearchy for querying patches. This is intended to replace PatchRangeTree if it is better.

Right now it returns the same patches as PatchRangeTree but the order of the patches may be different.

675 lines of code changed in 13 files:

luitjens 2008-07-17 11:59 Rev.: 41561

Untabified and indented

0 lines of code changed in 2 files:

luitjens 2008-07-17 11:21 Rev.: 41560

Moved into class, named compare, made static.... this seems to fix the build problems I was seeing.

73 lines of code changed in 3 files:

luitjens 2008-07-17 11:14 Rev.: 41559

Renamed compare to compareIt. Apparently compare was already used.

26 lines of code changed in 3 files:

luitjens 2008-07-17 11:09 Rev.: 41558

This function doesn't need to be static.

2 lines of code changed in 1 file:

jthornoc 2008-07-17 10:25 Rev.: 41557

Turned on exact comparison.

2 lines of code changed in 1 file:

jas 2008-07-17 09:41

Test the return types of getArrayBCValues.

17 lines of code changed in 2 files:

jas 2008-07-16 21:56 Rev.: 41552

Bullet proofing if a boundary condition is not found.

6 lines of code changed in 1 file:

jas 2008-07-16 21:55 Rev.: 41551

Add the auxiliary boundation condtion.

18 lines of code changed in 1 file:

jas 2008-07-16 21:55 Rev.: 41550

Add const.

2 lines of code changed in 1 file:

jas 2008-07-16 21:54 Rev.: 41549

Check for the auxiliary boundary condition.

12 lines of code changed in 1 file:

jas 2008-07-16 21:53

Do more careful casting to detect when the proper boundary condition is
returned.

118 lines of code changed in 3 files:

jas 2008-07-16 21:52 Rev.: 41545

Boundary condition that is referred to when looking for just the iterator
extents.

54 lines of code changed in 1 file:

jthornoc 2008-07-16 17:59 Rev.: 41540

Added two more simple regression tests for Arches. Will set gold standards and multipatch runs later.

2 lines of code changed in 1 file:

jthornoc 2008-07-16 17:33 Rev.: 41538

- Replaced some "fortran" type loops with cell iterators
- Cleaned some of the mms functionality in Arches.cc
- Added extrascalars to the constantMMS

68 lines of code changed in 3 files:

dav 2008-07-16 16:29 Rev.: 41536

Check for PNG in 3P by default.

12 lines of code changed in 2 files:

dav 2008-07-16 15:43 Rev.: 41535

New OSX OS not compatible with old 3P files... so differentiate.

4 lines of code changed in 2 files:

harman 2008-07-16 15:05 Rev.: 41534

Should not change the answers
getNodeIterator() -> getNodeIterator__New()

1 lines of code changed in 1 file:

qymeng 2008-07-16 14:01 Rev.: 41533

Fixed a problem which caused Uintah crashing on Ranger with Zoltan RCB/RIB algorithm.
This is because MPI_Comm_dup and MPI_Comm_split does not work correctly in some MPI implementations(which Ranger use).
Fortunately, there is an undocumented parameter in Zoltan to avoid using these functions.

1 lines of code changed in 1 file:

luitjens 2008-07-16 10:39 Rev.: 41532

Added some MallocTrace tags

3 lines of code changed in 1 file:

harman 2008-07-15 15:56 Rev.: 41525

This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

added {}
2 space indentation
formatting

78 lines of code changed in 1 file:

luitjens 2008-07-15 12:08 Rev.: 41524

Changed the union & difference iterators to sort in the same order that
Array3 is layed out, (Z,Y,X) where x changes first. All iterators
must enforce this ordering.

37 lines of code changed in 4 files:

luitjens 2008-07-15 11:33 Rev.: 41523

untabified and indented

0 lines of code changed in 2 files:

luitjens 2008-07-15 11:27 Rev.: 41522

untabified and indented

0 lines of code changed in 2 files:

luitjens 2008-07-15 11:23 Rev.: 41521

Tweaks to MallocTrace

28 lines of code changed in 8 files:

luitjens 2008-07-15 08:35 Rev.: 41518

Fixes for malloc trace and configure

7 lines of code changed in 2 files:

guilkey 2008-07-14 19:15 Rev.: 41516

Added an error message when file fails to open.

3 lines of code changed in 1 file:

luitjens 2008-07-14 18:39 Rev.: 41515

Added MallocTrace support to Uintah, cleaned up mpi includes, removed SCI_MALLOC_TRACE functionality.

Currently building with MallocTrace is only supported within Uintah.

212 lines of code changed in 68 files:

harman 2008-07-14 18:14 Rev.: 41514


This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

added {}
2 space indentation
formatting


272 lines of code changed in 2 files:

harman 2008-07-14 18:05 Rev.: 41513

removed #include debug.h
Not used.

0 lines of code changed in 2 files:

harman 2008-07-14 17:15 Rev.: 41512

not used

0 lines of code changed in 1 file:

dav 2008-07-14 16:39 Rev.: 41511

The #include of cmath avoids the OSX hack for isnan.

0 lines of code changed in 2 files:

dav 2008-07-14 16:37 Rev.: 41510

Fix indentation. Place 'std::' in the one place it is needed instead of shotgunning 'using namespace std'. :)

7 lines of code changed in 1 file:

harman 2008-07-14 16:14 Rev.: 41509

This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

added {}
2 space indentation
formatting

396 lines of code changed in 3 files:

dav 2008-07-14 15:32 Rev.: 41508

These are C header files, not C++ and thus can't use the C++ #includes.

0 lines of code changed in 4 files:

luitjens 2008-07-14 14:04 Rev.: 41507

Added the abililty to connect to the MallocTrace library by specifying
--with-MallocTrace=DIR


721 lines of code changed in 3 files:

harman 2008-07-14 12:37 Rev.: 41505

clean up some of the output
added a script that can be called from a nightly crontab job.

52 lines of code changed in 5 files:

luitjens 2008-07-14 10:42 Rev.: 41502

Fixed a few bugs in the new iterator code.

Added a testprogram/example of the new iterator code.


122 lines of code changed in 7 files:

jas 2008-07-13 14:34 Rev.: 41501

Add <cstring> include.

1 lines of code changed in 1 file:

dav 2008-07-11 15:03 Rev.: 41499

Fix for picky compilers...

0 lines of code changed in 2 files:

harman 2008-07-11 11:54 Rev.: 41498

- now running ICE/MPMICE tests
- analye_results.pl now modifies the title/xlabel/ylabel on the gnuplot script.

64 lines of code changed in 19 files:

harman 2008-07-11 10:26 Rev.: 41496

-pass the tst file to run_tests.pl & analyze_results.pl
-removed comparison file code. No longer needed.
-removed default gnuplot file code. User should just copy example gnuplot scripts
-cleaned up stdout output.

114 lines of code changed in 3 files:

luitjens 2008-07-10 18:33 Rev.: 41494

Fixed a bug that used == instead of string compare.

1 lines of code changed in 1 file:

guilkey 2008-07-10 12:13 Rev.: 41489

Fix computesAndRequires and friends for this model.

30 lines of code changed in 2 files:

jas 2008-07-10 04:13 Rev.: 41473

Use fill instead of bzero.

2 lines of code changed in 1 file:

harman 2008-07-09 16:29 Rev.: 41469

link_orderAccuracy:
- fixed previous commit

1 lines of code changed in 1 file:

harman 2008-07-09 15:26 Rev.: 41467

added a convience macro to make a symbolic link for orderAccuracy
inside of Uintah/Standalone

6 lines of code changed in 1 file:

harman 2008-07-09 14:53 Rev.: 41465

-documentation
-take into account xml tag name change (Interactive->sus_cmd & compCommand->compare_cmd)
-removed code related to pbs

55 lines of code changed in 1 file:

harman 2008-07-09 14:51 Rev.: 41464

-Documentation
-bulletproofing
-add comparisonUtils to Path

58 lines of code changed in 1 file:

harman 2008-07-09 14:48 Rev.: 41463

xml tag name change

Interactive -> sus_cmd
compCommand -> compare_cmd

59 lines of code changed in 10 files:

luitjens 2008-07-09 10:45 Rev.: 41457

Reverted some changes because it breaks icc builds. A more robust solution using #ifdefs is needed

1 lines of code changed in 1 file:

luitjens 2008-07-09 09:13 Rev.: 41453

Added braces to avoid an ambiguity

0 lines of code changed in 2 files:

luitjens 2008-07-09 08:54 Rev.: 41452

Fixed a gcc compiler error. It still gives a warning about the header being depericated but it compiles

1 lines of code changed in 1 file:

luitjens 2008-07-09 08:29 Rev.: 41451

gcc-4.3 fix

1 lines of code changed in 1 file:

luitjens 2008-07-09 07:59 Rev.: 41450

Added using namespace std;

This fixes a compile problem on Darwin

Justin

1 lines of code changed in 1 file:

harman 2008-07-08 17:45 Rev.: 41441

This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

added {}
2 space indentation

830 lines of code changed in 1 file:

harman 2008-07-08 16:54 Rev.: 41439

This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

added {}
2 space indentation
formatting

279 lines of code changed in 1 file:

harman 2008-07-08 16:54 Rev.: 41438

This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

added {}
2 space indentation

formatting.

590 lines of code changed in 1 file:

jas 2008-07-07 20:07 Rev.: 41434

Use the proper c++ standard for include files for the C inlude files, i.e.
<stdio.h> --> <cstdio>
<math.h> --> <cmath>

Tested on g++ 4.2 and 4.3 compilers.

6238 lines of code changed in 1495 files:

harman 2008-07-07 17:19 Rev.: 41429

This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

added {}
2 space indentation

formatting.

905 lines of code changed in 2 files:

harman 2008-07-07 14:30 Rev.: 41426

This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

added {}
2 space indentation


ScalarSolver.cc: fixed sloppy previous commit.


205 lines of code changed in 3 files:

harman 2008-07-07 14:07 Rev.: 41425

This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

added {}
2 space indentation

175 lines of code changed in 2 files:

jas 2008-07-04 18:17 Rev.: 41419

Fix memory leak.

1 lines of code changed in 1 file:

harman 2008-07-03 15:28 Rev.: 41418

This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

added {}
2 space indentation

721 lines of code changed in 2 files:

harman 2008-07-03 15:27 Rev.: 41417

previous commit had debugging code in it.

0 lines of code changed in 1 file:

harman 2008-07-03 13:16 Rev.: 41414

This commit should not change the answers:
rework requires/allocatePut

Ghost::AroundCells -> gac
Ghost::None -> gn
Ghost::AroundFaces -> gaf

- fixed compiler warnings
- deleted unused variables

206 lines of code changed in 3 files:

harman 2008-07-03 12:54 Rev.: 41411

Number of lines of code
number of conditionals
number of tasks

212 lines of code changed in 1 file:

luitjens 2008-07-03 08:11 Rev.: 41408

Added some comments

6 lines of code changed in 1 file:

jas 2008-07-02 20:47 Rev.: 41407

Fix several memory leaks.

Use cstdio.

Remove ifdef'd out code in the _NEW() functions.

18 lines of code changed in 4 files:

luitjens 2008-07-02 17:55 Rev.: 41406

Added GridIterator to the new iterator framework. This iterator iterates between a high and a low point a
nd should replace CellIterator and NodeIterator.

Added two new Iterators.

UnionIterator: Combines two iterators into a single iterator, duplicated cells are only hit once, the un
ion is stored as a list of cells.
DifferenceIterator: Iterates over the difference of two iterators, the difference is stored as a list of
cells.

Added the function reset to all iterators. This function should reset the iterator to the first element.

These new iterators are currently untested.



404 lines of code changed in 11 files:

luitjens 2008-07-02 09:59 Rev.: 41398

Converted to the new standard headers. This is a test to see if compilers accept this. So far I have checked gcc-4.2 and intel-10.1.


1 lines of code changed in 1 file:

jas 2008-07-01 19:28

Add include file for g++-4.3.

3 lines of code changed in 3 files:

jas 2008-07-01 18:14 Rev.: 41393

Add the == operator to the various BCGeomBase classes.

Combine the various BC data into unique BCGeometry types. There are no
longer multiple instances of BCGeomBase objects. -- BCDataArray.cc

Change the algorithm for creating the various DifferenceBCData types
when processing complicated boundary conditions. The resultant algorithm
is simpler and more complete than the previous one due to the coalescing
of BCGeometry types in the BCDataArray class.

406 lines of code changed in 18 files:

harman 2008-07-01 14:34 Rev.: 41390

This should not change the answers:
-tabs
-2 space indentation
-lifted ban on {} on loops/conditional statements

8584 lines of code changed in 16 files:

June 2008 »

Generated by StatSVN 0.4.0