The NIH/NIGMS
Center for Integrative Biomedical Computing

SCI Publications

2008


Y. Livnat, S.G. Parker, C.R. Johnson. “Fast Isosurface Extraction Methods for Large Image Data Sets,” In Handbook of Medical Image Processing and Analysis, 2nd edition, Ch. 47, Note: (to appear), Edited by Isaac N. Bankman, Elsevier, pp. 801--816. 2008.


C.J. McGann, E.G. Kholmovski, R.S. Oakes, J.J. Blauer, M. Daccarett, N. Segerson, K.J. Airey, N. Akoum, E. Fish, T.J. Badger, E.V. DiBella, D.L. Parker, R.S. MacLeod, N.F. Marrouche. “New Magnetic Resonance Imaging-Based Method for Defining the Extent of Left Atrial Wall Injury After the Ablation of Atrial Fibrillation,” In Journal of the American College of Cardiology, Vol. 52, No. 15, pp. 1263--1271. Oct 7, 2008.


M.D. Meyer, R.T. Whitaker, R.M. Kirby, C. Ledergerber, H. Pfister. “Particle-based Sampling and Meshing of Surfaces in Multimaterial Volumes,” In IEEE Transactions on Visualization and Computer Graphics, Vol. 14, No. 6, pp. 1539--1546. 2008.


I. Oguz, J. Cates, P.T. Fletcher, R.T. Whitaker, D. Cool, S. Aylward, M. Styner. “Cortical Correspondence using Entropy-Based Particle Systems and Local Features,” In 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008. (ISBI 2008), pp. 1637--1640. 2008.


S. Pizer, M. Styner, T. Terriberry, R. Broadhurst, S. Joshi, E. Chaney, P.T. Fletcher. “Statistical Applications with Deformable M-Reps,” In Computational Imaging and Vision, Springer, pp. 269--308. 2008.
DOI: 10.1007/978-1-4020-8658-8_9


K. Potter, J. Krüger, C.R. Johnson. “Towards the Visualization of Multi-Dimentional Stochastic Distribution Data,” In Proceedings of The International Conference on Computer Graphics and Visualization (IADIS) 2008, pp. 191--196. 2008.


J.F. Shepherd, C.R. Johnson. “Hexahedral Mesh Generation Constraints,” In Journal of Engineering with Computers, Vol. 24, No. 3, pp. 195--213. 2008.


A.G. Shvedko, M.D. Warren, S. Shome, J.G. Stinstra, A.V. Zaitsev. “Influence of the Skeletal Muscle Activity on Time and Frequency Domain Properties of the Body Surface ECG During Evolving Ventricular Fibrillation in the Pig,” In Resuscitation, Vol. 78, No. 2, pp. 215--223. May 24, 2008.
DOI: 10.1016/j.resuscitation.2008.03.010


J.G. Stinstra, M.A. Jolley, J.D. Tate, D.H. Brooks, J.K. Triedman, R.S. MacLeod. “The Role of Volume Conductivities in Simulation of Implantable Defibrillators,” In Computers in Cardiology, Bologna, Italy, 2008.


J.G. Stinstra, M. Jolley, M. Callahan, D.M. Weinstein, M. Cole, D.H. Brooks, J. Triedman, R.S. MacLeod. “Evaluation of Different Meshing Algorithms in the Computation of Defibrillation Thresholds in Children,” In Proceedings of the 29th Annual International Conference of the IEEE EMBS, pp. 1422-1425. 2008.
ISBN: 978-1-4244-0787-3


D.R. Sutherland, Q. Ni, R.S. MacLeod, R.L. Lux, B.B. Punske. “Experimental Measures of Ventricular Activation and Synchrony,” In Pacing and Clinical Electrophysiology, Vol. 31, No. 12, pp. 1560--1570. December, 2008.


B. Taccardi, B.B. Punske, E. Macchi, R.S. MacLeod, P.R. Ershler. “Epicardial and Intramural Excitation During Ventricular Pacing: Effect of Myocardial Structure,” In The American Journal of Physiology - Heart and Circulatory Physiology, Vol. 294, No. 4, pp. H1753--1766. April, 2008.
DOI: 10.1152/ajpheart.01400.2007


X. Tricoche, R.S. MacLeod, C.R. Johnson. “Visual Analysis of Bioelectric Fields,” In Visualization in Medicine and Life Sciences, Mathematics and Visualization, Springer-Verlag, pp. 205--220. 2008.


J.K. Triedman, M. Jolley, J. Stinstra, D.H. Brooks, R.S. MacLeod. “Predictive Modeling of Defibrillation Using Hexahedral and Tetrahedral Finite Element Models: Recent Advances,” In Journal of Electrocardiology, Vol. 41, pp. 483--486. 2008.


S.X. Vasquez, M.S. Hansen, A.N. Bahadur, M.F. Hockin, G.L. Kindlmann, L. Nevell, I.Q. Wu, D.J. Grunwald, D.M. Weinstein, G.M. Jones, C.R. Johnson, J.L. Vandeberg, M.R. Capecchi, C. Keller. “Optimization of Volumetric Computed Tomography for Skeletal Analysis of Model Genetic Organisms,” In The Anatomical Record: Advances in Integrative Anatomy and Evolutionary Biology, Vol. 291, pp. 475--487. 2008.
PubMed ID: 18286615

2007


G. Adluru, S.P. Awate, T. Tasdizen, R.T. Whitaker, E.V.R. DiBella. “Temporally Constrained Reconstruction of Dynamic Cardiac Perfusion MRI,” In Magnetic Resonance in Medicine, Vol. 57, pp. 1027--1036. 2007.


G. Adluru, R.T. Whitaker, E.V.R. DiBella. “Spatio-Temporal Constrained Reconstruction of Sparse Dynamic Contrast Enhanced Radial MRI Data,” In Proceedings of the IEEE International Symposium on Biomedical Imaging, pp. 109--112. 2007.


G. Adluru, E. Hsu, E.V.R. DiBella. “Constrained Reconstruction of Sparse Cardiac MR DTI Data,” In Proceedings of FIMH 2007, LNCS, No. 4466, pp. 91--99. 2007.


D.H. Brooks, A. Keely, A. Ghodrati, G. Tadmor, R.S. MacLeod. “Some Spatio-Temporal Approaches to Inverse Electrocardiography,” In Proc. Asilomar Conf. on Signals, Systems, and Computers, Pacific Grove, CA, November, 2007.
DOI: 10.1109/ACSSC.2007.4487316


M. Callahan, M.J. Cole, J.F. Shepherd, J.G. Stinstra, C.R. Johnson. “BioMesh3D: A Meshing Pipeline for Biomedical Models,” SCI Institute Technical Report, No. UUSCI-2007-009, University of Utah, 2007.