Directory CCA/Components/Arches/Radiation/

Total Files:
15
Deleted Files:
0
Lines of Code:
5246

[root]/CCA/Components/Arches/Radiation
                    directory in repo fortran (25 files, 3433 lines)

Lines of Code

CCA/Components/Arches/Radiation/ Lines of Code

Developers

Author Changes Lines of Code Lines per Change
Totals 76 (100.0%) 1517 (100.0%) 19.9
derekhar 40 (52.6%) 1244 (82.0%) 31.1
dsunder 2 (2.6%) 181 (11.9%) 90.5
jas 22 (28.9%) 79 (5.2%) 3.5
jsutherland 4 (5.3%) 8 (0.5%) 2.0
ahumphrey 6 (7.9%) 4 (0.3%) 0.6
dav 2 (2.6%) 1 (0.1%) 0.5

Most Recent Commits

derekhar 2016-10-14 11:12 Rev.: 55881

Added adjustment factor for fluxes. This is needed for the new quadrature set, Legenre-Chebyshev. This will change the Fluxes for all radiation tests. In most cases the Diff should be isolated to the fluxes.

0 lines of code changed in 4 files:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (new), DORadiationModel.h (new)
jsutherland 2016-10-05 09:15 Rev.: 55839

Enable GPU calculation with RadProps (in Wasatch).
Changes to RadProps consistent with API changes made in conjunction with this commit.

8 lines of code changed in 4 files:

  • CCA/Components/Arches/Radiation: RadPropertyCalculator.cc (new), RadPropertyCalculator.h (+4 -4)
derekhar 2016-09-27 17:14 Rev.: 55811

Clean-Up. Renamed class variables, added header compiler directives.

6 lines of code changed in 4 files:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+2 -9), DORadiationModel.h (+1 -1), LegendreChebyshevQuad.h (+3 -1)
derekhar 2016-09-27 15:37 Rev.: 55808

Added a new quadrature set for radiation in Arches.

180 lines of code changed in 3 files:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+29 -2), DORadiationModel.h (+1), LegendreChebyshevQuad.h (+150)
dav 2016-09-19 17:47 Rev.: 55766

The main changes in this commit only effect a simulation when <outputNthProc> is
set (> 1) in the .ups file.

This commit allows for PIDX output on every process for a time step
output, while using every Nth process (if so specified) for UDA
checkpoint output. Eventually the need for this Nth Proc changing
hack (and Nth proc output itself) should go away when PIDX fully takes
over I/O.

Note, when using "Nth Process Output", both a checkpoint and a time step save
CANNOT occur on the same time step. Therefore the time step output is postponed
for one time step.

On a slightly different note, we use the term proc badly... we should use process,
or perhaps better yet, rank... as proc is usually taken to mean "processor", but
in MPI's case, means process - and the term MPI uses for process is rank.

D CCA/Ports/LoadBalancer.cc
D CCA/Ports/LoadBalancer.h
A + CCA/Ports/LoadBalancerPort.cc
A + CCA/Ports/LoadBalancerPort.h

- Renamed from LoadBalancer to LoadBalancerPort to avoid confusion with the LoadBalancer itself.
- Added "setNthProc()" so that the SimulationController can change the value as needed.

M CCA/Components/DataArchiver/DataArchiver.h
M CCA/Components/DataArchiver/DataArchiver.cc

- Added postponeNextOutputTimestep(). This pushes off the output of a time step by one
time step. (This occurs if using Nth Process Output and a checkpoint and a time step
where to occur on the same time step.)
- Added savingAsPIDX() boolean query function so that the SimulationController
can avoid doing all of this hack when we are not using PIDX.
- Removed "getCurrentTimestep()" and "getCurrentTime()", as, per the documentation on them,
they should not be used anyway; you should get this info from the shared state. Note,
the DataArchiver name (getCurrentTime()) is different from the shared state name
(getElapsedTime()) which was also confusing.
- Pass const string parameters by reference.
- White space cleanup / alignments.

- If the input file has no <save> labels, but specifies an output interval, throw an exception.
- If the 'logname' is not available when running a simulation, put 'unknown' instead of ignoring.
Should probably find a better fix then 'unknown', but that will have to wait for another day.
- Swat some evil endls. :)
- Don't calculate 'currsecs' on every process, just on rank 0.
- Removed all calls to usingMPI() as Alan deprecated it in a recent commit.
- procOnLevel is (I hope) a boolean array... so declare and use it as such.
- Don't name a variable with a single letter. n -> var_cnt

- Did I mention white space cleanups... Please for the sake of older eyes...

M CCA/Components/ICE/ICE.cc
M CCA/Components/Models/FluidsBased/AdiabaticTable.cc
M CCA/Components/Models/FluidsBased/NonAdiabaticTable.cc
M CCA/Components/Models/FluidsBased/NonAdiabaticTable.h
M CCA/Components/Models/FluidsBased/SimpleRxn.cc
M CCA/Components/Models/FluidsBased/SimpleRxn.h
M CCA/Components/Models/Radiation/RMCRT/Radiometer.cc
M CCA/Components/OnTheFlyAnalysis/MinMax.cc
M CCA/Components/OnTheFlyAnalysis/1stLawThermo.cc
M CCA/Components/OnTheFlyAnalysis/containerExtract.cc
M CCA/Components/OnTheFlyAnalysis/lineExtract.cc
M CCA/Components/OnTheFlyAnalysis/momentumAnalysis.cc
M CCA/Components/OnTheFlyAnalysis/particleExtract.cc
M CCA/Components/OnTheFlyAnalysis/planeExtract.cc
M CCA/Components/OnTheFlyAnalysis/statistics.cc

- Use shared state getElapsedTime()
- Naming conventions: sharedState -> d_sharedState (to match other class vars in file).
- White space / alignments / etc.

M CCA/Components/LoadBalancers/CostProfiler.cc

- White space separation of #includes between CCA and Core

M CCA/Components/Arches/PressureSolverV2.cc
M CCA/Components/Arches/Radiation/RadPetscSolver.cc
M CCA/Components/Examples/Poisson2.cc
M CCA/Components/Examples/DOSweep.cc
M CCA/Components/Examples/RMCRT_Test.cc
M CCA/Components/Examples/RegridderTest.cc
M CCA/Components/Examples/SolverTest1.cc
M CCA/Components/FVM/ElectrostaticSolve.cc
M CCA/Components/ICE/impAMRICE.cc
M CCA/Components/ICE/impICE.cc
M CCA/Components/LoadBalancers/CostProfiler.h
M CCA/Components/LoadBalancers/DynamicLoadBalancer.cc
M CCA/Components/LoadBalancers/ParticleLoadBalancer.cc
M CCA/Components/MPM/AMRMPM.cc
M CCA/Components/MPM/ImpMPM.cc
M CCA/Components/MPM/SerialMPM.cc
M CCA/Components/Parent/Switcher.cc
M CCA/Components/ReduceUda/UdaReducer.h
M CCA/Components/ReduceUda/UdaReducer.cc
M CCA/Components/Regridder/RegridderCommon.h
M CCA/Components/Regridder/RegridderCommon.cc
M CCA/Components/Regridder/SingleLevelRegridder.cc

- LoadBalancer -> LoadBalancerPort
- White space cleanup / alignments.

M CCA/Components/LoadBalancers/LoadBalancerCommon.h
M CCA/Components/LoadBalancers/LoadBalancerCommon.cc

- LoadBalancer -> LoadBalancerPort.
- Add setNthRank().
- getOutputProc() -> getOutputRank().
- Whitespace / alignment.
- Fix comment to indicate getOutputProc is returning an MPI rank.

M CCA/Components/LoadBalancers/ProfileDriver.h
M CCA/Components/LoadBalancers/ProfileDriver.cc
M CCA/Components/Regridder/TiledRegridder.cc
M CCA/Components/Schedulers/MPIScheduler.cc
M CCA/Components/Schedulers/SchedulerCommon.h
M CCA/Components/Schedulers/SchedulerCommon.cc

- Cosmetics: Whitespace / alignment / coding standards / alphabetize #includes / etc.
- LoadBalancer -> LoadBalancerPort

M CCA/Components/Schedulers/OnDemandDataWarehouse.h
M CCA/Components/Schedulers/OnDemandDataWarehouse.cc
M CCA/Components/Schedulers/Relocate.h
M CCA/Components/Schedulers/Relocate.cc

- Name class variables according to naming convention. (eg: aborted -> d_aborted).
- Be consistent with naming convention of class variables in same file.
- LoadBalancer -> LoadBalancerPort.

M CCA/Components/Schedulers/TaskGraph.h
M CCA/Components/Schedulers/TaskGraph.cc

- LoadBalancer -> LoadBalancerPort.
- White space. Name variable "subset" more accurately: "handling_rank". I don't know
why it was named "subset" to begin with as it doesn't appear to be a "set" to me...

M CCA/Components/Schedulers/UnifiedScheduler.cc

- White space.

M CCA/Components/SimulationController/AMRSimulationController.cc

- There are a lot of cosmetic cleanups in this file, but the real/main change is:
- Add in hack to handle changing from "nth process output" (for checkpoints) to
"1 process output" (for time steps) when running with PIDX (and nth process is > 1).
- Declare variables (start) where they are used, not at the top of a function.
- Move the terminal output of the 0th timestep out of the main simulation loop.
- White space / alignment / etc.
- LoadBalancer -> LoadBalancerPort.

M CCA/Components/SimulationController/SimulationController.h
M CCA/Components/SimulationController/SimulationController.cc
M CCA/Components/Solvers/AMR/AMRSolver.cc
M CCA/Components/Solvers/AMR/HypreDriver.cc
M CCA/Components/Solvers/AMR/HypreDriverStruct.cc
M CCA/Components/Solvers/CGSolver.cc
M CCA/Components/Solvers/HypreSolver.cc
M CCA/Components/Wasatch/Expressions/Coordinate.cc
M CCA/Components/Wasatch/Expressions/PoissonExpression.cc
M CCA/Components/Wasatch/Expressions/Pressure.cc
M CCA/Components/Wasatch/Expressions/RadiationSource.cc
M CCA/Components/Wasatch/Wasatch.cc
M CCA/Ports/Scheduler.h
M CCA/Ports/sub.mk
M Core/DataArchive/DataArchive.h
M Core/DataArchive/DataArchive.cc
M Core/Grid/Grid.h
M Core/Grid/Grid.cc
M Core/Grid/Level.h
M Core/Grid/Level.cc
M StandAlone/tools/uda2vis/uda2vis.cc

- LoadBalancer -> LoadBalancerPort.
- Cosmetic white space, alpha, etc.

M CCA/Ports/Output.h

- Removed getCurrentTimestep() and getCurrentTime() as the user should get
them from the shared state.
- Added postponeNextOutputTimestep().
- Added savingAsPIDX().



1 lines of code changed in 2 files:

  • CCA/Components/Arches/Radiation: RadPetscSolver.cc (new)
derekhar 2016-08-31 12:00 Rev.: 55686

Added Burns-Christion using the Arches Task Interface. Changes to Discrete-Ordinates to be compatible with this interface were also made.

35 lines of code changed in 1 file:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+35 -29)
ahumphrey 2016-06-07 09:19 Rev.: 55420

Removal of src/Core/Thread and related refactoring throughout the code-base.

This is the first step in a series of infrastrucutre overhauls to modernize Uintah. Though this all passes local RT (both CPU and GPU tests), I expect some fallout we haven't considered and will be standing by to deal with any issues. Once the dust settles, we will move to replacing Core/Malloc with jemalloc.

* We are now using the standard library for all multi-threading needs within the infrastructure, e.g. std::atomic, std::thread, std::mutex, etc.

* The Unified Scheduler is now the only multi-threaded scheduler, e.g. ThreadedMPIScheduler no longer exists (though the source will soon be placed into an attic).

* Threads spawned by the Unified Scheduler are detached by default (not joinable), allowing for easy, clean and independent execution. There are no longer ConditionVariables used to signal worker threads, just a simple enum for thread-state.

* What was Core/Thread/Time.* is now Core/Util/Time.* - a next step will be to migrate all internal timers, etc to use std::chrono.

* NOTE: Though much cleanup has occurred with this commit, there is still significant cleanup and formatting to be done. The scope of this commit neccessitates a more incremental approach.

4 lines of code changed in 6 files:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+1 -1), DORadiationModelV2.cc (+1 -1), RadHypreSolver.cc (+1 -1), RadPetscSolver.cc (+1 -1)
dsunder 2016-05-04 16:07 Rev.: 55310

Refactor Array3 to remove iterator to make it possible to merge trunk
into the kokkos_dev branch

68 lines of code changed in 1 file:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+68 -74)
derekhar 2016-04-27 17:19 Rev.: 55251

Removed the unnecessary creation of several IntVectors.

11 lines of code changed in 1 file:

  • CCA/Components/Arches/Radiation: RadHypreSolver.cc (+11 -11)
derekhar 2016-04-27 17:08 Rev.: 55250

Reduced the creation and deletion of hypre objects. This should give a small speed up of the radiation solve at scale. To maintain support for the petsc solver, minor changes to petsc were also made.

181 lines of code changed in 10 files:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+10 -3), DORadiationModel.h (+1), RadHypreSolver.cc (+152 -124), RadHypreSolver.h (new), RadPetscSolver.cc (+2 -1), RadPetscSolver.h (+4), RadiationSolver.h (new)
derekhar 2016-04-15 14:59 Rev.: 55195

Initialize intensities in extra cells for discrete-ordinates for viz purposes.

4 lines of code changed in 1 file:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+4)
jas 2016-03-15 18:24 Rev.: 55024

Move non-conflicting classes that were in SCIRun namespace to Uintah namespace.

67 lines of code changed in 7 files:

  • CCA/Components/Arches/Radiation: DORadiationModel.h (+6 -6), RadHypreSolver.cc (+5 -5), RadHypreSolver.h (-1), RadPetscSolver.h (-1), RadPropertyCalculator.cc (+24 -24), RadPropertyCalculator.h (+32 -32), RadiationSolver.h (-1)
derekhar 2016-03-03 09:59 Rev.: 54965

Stylistic change to functor.

197 lines of code changed in 1 file:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+197 -197)
derekhar 2016-03-02 12:26 Rev.: 54946

Functorized the computation of the radiation fluxes, incident radiation, and heat-flux divergence.

174 lines of code changed in 1 file:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+174 -17)
derekhar 2016-03-01 15:45 Rev.: 54939

Cleaned up kokkos compiler directives. Use Dan Sunderland's new interface for accessing grid variables.

4 lines of code changed in 1 file:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+4 -55)
dsunder 2016-03-01 13:48 Rev.: 54936

Add operator()(int i, int j, int k) to constVariable and update Poisson1 to always use a functor

113 lines of code changed in 1 file:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+113 -123)
derekhar 2016-02-24 17:31 Rev.: 54904

Fixed kokkos box iteration range, in construction of the A_matrix for radiation.

4 lines of code changed in 1 file:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+4 -6)
derekhar 2016-02-23 17:18 Rev.: 54888

DORadiation can now construct the Amatrix in radiation using kokkos.

51 lines of code changed in 1 file:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+51 -58)
derekhar 2016-02-09 16:12 Rev.: 54808

Fixed a virtual class to be consistent with its parent class. Building arches without petsc remains possible.

0 lines of code changed in 2 files:

  • CCA/Components/Arches/Radiation: FakeRadPetscSolver.cc (changed)
derekhar 2016-02-08 17:44 Rev.: 54801

Changed Arches-hypre interface to take advantage of 4-point stencil data management.
Added construction of A-matrix using a c++ functor.

This commit is expected to change the solutions to all arches-radiation Regression tests.

282 lines of code changed in 7 files:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+277 -31), DORadiationModel.h (+5 -7), RadHypreSolver.cc (-3), RadHypreSolver.h (-3), RadPetscSolver.cc (-3), RadPetscSolver.h (-3), RadiationSolver.h (-3)
derekhar 2016-01-28 15:25 Rev.: 54743

Fixed a few of the radiation solvers within the Arches-Hypre interface. Solver and precondition pfmg now works correctly.

115 lines of code changed in 2 files:

  • CCA/Components/Arches/Radiation: RadHypreSolver.cc (+112 -48), RadHypreSolver.h (+3 -2)
jas 2016-01-08 15:45 Rev.: 54640

Update copyright date to 2016.

12 lines of code changed in 15 files:

  • CCA/Components/Arches/Radiation: DORadiationModel.cc (+1 -1), DORadiationModel.h (+1 -1), DORadiationModelV2.cc (+1 -1), DORadiationModelV2.h (+1 -1), FakeRadPetscSolver.cc (+1 -1), RadHypreSolver.cc (+1 -1), RadHypreSolver.h (+1 -1), RadPetscSolver.cc (+1 -1), RadPetscSolver.h (+1 -1), RadiationSolver.cc (new), RadiationSolver.h (+1 -1), sub.mk (new)
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