August 2006 Commit Log

Number of Commits:
132
Number of Active Developers:
17
luitjens 2006-08-31 21:15 Rev.: 35194

Fixed a random lockup that occured after running for a while.

29 lines of code changed in 3 files:

luitjens 2006-08-31 13:28 Rev.: 35190

Fixed bug where refinements were taken 1 level to far causing in rare
cases the bit histories to overflow which in turn would cause the SFC
curve to be incorrect and would in some cases crash sus.

32 lines of code changed in 1 file:

worthen 2006-08-30 10:23 Rev.: 35182

Mechanism to overwrite web results instead of erasing them

0 lines of code changed in 2 files:

luitjens 2006-08-30 09:40 Rev.: 35181

Added a debug dump to help track a potential bug that pops up very
rarely when using the SFC code.

32 lines of code changed in 1 file:

dbrayford 2006-08-29 10:51 Rev.: 35169

replicate branch fix

0 lines of code changed in 2 files:

worthen 2006-08-28 15:43 Rev.: 35150

Copy all but the udas to the web server

19 lines of code changed in 1 file:

worthen 2006-08-28 13:04 Rev.: 35145

Fix for timestep restart Reduction output

3 lines of code changed in 1 file:

worthen 2006-08-28 12:06 Rev.: 35144

Add Regridder and Component information to the first few lines of sus output

8 lines of code changed in 4 files:

luitjens 2006-08-28 11:55 Rev.: 35143

Fixed 1D SFC, should work now.

13 lines of code changed in 1 file:

borodai 2006-08-28 11:22 Rev.: 35142

Fix for MPMArches. Again. I hate this.

2 lines of code changed in 1 file:

dmw 2006-08-26 23:34 Rev.: 35140

- Fix socket code to work on OSX

15 lines of code changed in 1 file:

luitjens 2006-08-26 16:52 Rev.: 35139

Added char and short to the bit classes.
Now clamp refinements instead of kill the program.
Implemented 1D SFC (untested)

113 lines of code changed in 4 files:

worthen 2006-08-25 17:01 Rev.: 35138

Windows compilation maintenance

Other changes include:
Increase max number of semaphore count
Getting scirun to load a multi-word net name from command line or load menu

1450 lines of code changed in 20 files:

worthen 2006-08-25 15:45 Rev.: 35137

increase epsilon to e-14, to satisfy multi-meter domains

8 lines of code changed in 1 file:

kuzimmer 2006-08-25 15:30 Rev.: 35136

Simple EXT_frame_buffer_object class

259 lines of code changed in 2 files:

kuzimmer 2006-08-25 14:56 Rev.: 35134

ARB_pixel_buffer_objects working with EXT_frame_buffer_objects, thanks Guo-Shi

139 lines of code changed in 5 files:

ayla 2006-08-25 14:34 Rev.: 35133

Provide general shared object library loader function for component models. Add additional library checks for component libraries.

0 lines of code changed in 48 files:

borodai 2006-08-25 13:13 Rev.: 35131

Fix for MPMArches

3 lines of code changed in 2 files:

worthen 2006-08-25 11:35 Rev.: 35130

revert changes to MPIScheduler's MPI_Buffers

5 lines of code changed in 1 file:

luitjens 2006-08-25 10:33 Rev.: 35129

Give memory back to STL earlier, may increase performance.

30 lines of code changed in 2 files:

luitjens 2006-08-24 11:53 Rev.: 35128

Use parallel SFC if number of patches is large enough otherwise use
serial.

100 lines of code changed in 1 file:

luitjens 2006-08-24 11:33 Rev.: 35126

Fixed parallel SFC formation

5 lines of code changed in 1 file:

ayla 2006-08-23 16:29 Rev.: 35120

Fix Babel build bug.

0 lines of code changed in 2 files:

borodai 2006-08-23 14:42 Rev.: 35119

Garbage cleanup

0 lines of code changed in 1 file:

dav 2006-08-22 17:12 Rev.: 35115


M configure
M configure.ac

- Turn off fortran underscore hack on MCR (@LLNL) in addition to ALC.

- Fix --with-png to add /lib and /include to the path given... thus,
you should do something like --with-png=/sw (eg: on a Mac) and then
configure will look in /sw/lib and /sw/include for the libs/incs.

9 lines of code changed in 2 files:

harman 2006-08-22 13:42 Rev.: 35108

added totalMassBurned and totalHeatReleased to the other HE models

169 lines of code changed in 8 files:

kuzimmer 2006-08-21 22:59 Rev.: 35104

trying to add pixel_buffer_object support for faster rendering, not working yet.

59 lines of code changed in 3 files:

harman 2006-08-21 17:43 Rev.: 35103

added ability to write to a dat file the total mass burned and total energy
released per timestep.
<totalMassBurned>
<totalHeatReleased>

Most of the changes are for passing the full problem_spec into models
Still need to update the other HE chem. models

105 lines of code changed in 9 files:

guilkey 2006-08-21 17:31 Rev.: 35102

Removed require and get for delT for interpolatePAndGradP.

0 lines of code changed in 1 file:

ashwinds 2006-08-21 11:49 Rev.: 35098

Modifications to ComponentWizardDialog and Helper

100 lines of code changed in 5 files:

luitjens 2006-08-21 11:28 Rev.: 35097

Modified the format for debug output such that flags are now optional.

42 lines of code changed in 1 file:

kuzimmer 2006-08-19 12:01 Rev.: 35096

add the particle and advection shaders to this directory for now

126 lines of code changed in 4 files:

kuzimmer 2006-08-19 11:59 Rev.: 35095

add slider to change the number of particles, modify step size range

49 lines of code changed in 4 files:

ashwinds 2006-08-18 15:48 Rev.: 35093

Modifications to Event Service SIDL interfaces

1 lines of code changed in 1 file:

mjc 2006-08-18 15:24 Rev.: 35092

use Socket class, connect to broker, register, and recieve data.

0 lines of code changed in 2 files:

mjc 2006-08-18 15:23 Rev.: 35091

add basic socket class wrapper

342 lines of code changed in 3 files:

ramanuja 2006-08-18 14:53 Rev.: 35090

Added a -L option to run the compare operation for last time step only. This is used in the bath verification project of ICE code

50 lines of code changed in 1 file:

harman 2006-08-18 13:27 Rev.: 35089

These scripts appear to be working.

0 lines of code changed in 4 files:

ashwinds 2006-08-18 12:00 Rev.: 35088

Event Service Usage in GUIBuilder and BuilderService

65 lines of code changed in 3 files:

luitjens 2006-08-17 16:44 Rev.: 35083

Compute SFC in serial for now (faster with our problem sizes).

168 lines of code changed in 2 files:

luitjens 2006-08-17 16:39 Rev.: 35082

Bryan Fix: Fixed a crash bug when calculating stats

11 lines of code changed in 1 file:

luitjens 2006-08-17 16:38 Rev.: 35081

Changes by Bryan : Load Balancers before computing patch statistics

42 lines of code changed in 1 file:

harman 2006-08-17 15:23 Rev.: 35079

added LLNL/usr/gapps/uintah/scripts to svn.

540 lines of code changed in 12 files:

kuzimmer 2006-08-17 14:44 Rev.: 35077

Add domain scaling interface for uda

145 lines of code changed in 7 files:

kuzimmer 2006-08-17 14:42 Rev.: 35076

Allow scaling of the uda domain for visualization

10 lines of code changed in 2 files:

ayla 2006-08-16 17:09 Rev.: 35070

Fix code formatting.

0 lines of code changed in 2 files:

ayla 2006-08-16 17:06 Rev.: 35069

Event service interface documentation, app loader changes.

60 lines of code changed in 2 files:

ayla 2006-08-16 17:01 Rev.: 35068

Dataflow interface update, app loader extended to service.

660 lines of code changed in 29 files:

ayla 2006-08-16 16:57 Rev.: 35067

Simplify component creation, extend app loader and move builder management to GUIService.

71 lines of code changed in 8 files:

ayla 2006-08-16 16:54 Rev.: 35066

Turn off debugging output by default.

1 lines of code changed in 1 file:

harman 2006-08-16 16:29 Rev.: 35065

fineLevel_CFI_Iterator()
- Added a special test isRight_CP_FP
// Imagine if the face of the fine patch is on the border of a coarse patch face
// For example fine patch face y- and coarse patch face y+ share share a border in physical space

Currently #if 0

23 lines of code changed in 1 file:

ashwinds 2006-08-16 14:48 Rev.: 35064

Modifications to the EventService prototype

52 lines of code changed in 5 files:

callahan 2006-08-16 14:01 Rev.: 35063

Fix 256x64 image rendering, fix memory leak.

0 lines of code changed in 2 files:

borodai 2006-08-16 13:49 Rev.: 35062

Added an option to filter scalar used to normalize variance.
It is on by default. Favre filter is used for CompDynamicProcedure,
Reynolds for IncDynamicProcedure and none for Smagorinsky model.

257 lines of code changed in 17 files:

worthen 2006-08-16 13:07 Rev.: 35061

Some better lb stats

133 lines of code changed in 2 files:

luitjens 2006-08-16 12:22 Rev.: 35059

Possible fix for SFC crashing

24 lines of code changed in 1 file:

luitjens 2006-08-16 12:19 Rev.: 35058

Fixed an overflow error

25 lines of code changed in 1 file:

callahan 2006-08-15 18:18 Rev.: 35054

minor cleanup, fix error messages.

0 lines of code changed in 2 files:

callahan 2006-08-15 18:18 Rev.: 35053

Fix nrrdKind, we're sending separate scalars and not a nrrdKind4Color blob. Also use memcpy to make nrrd, faster and more accurate.

0 lines of code changed in 2 files:

callahan 2006-08-15 18:17 Rev.: 35052

Fix crash bug in png reader.

0 lines of code changed in 2 files:

callahan 2006-08-15 18:16 Rev.: 35051

Add more complete set of nrrd kinds to NrrdInfo

0 lines of code changed in 2 files:

callahan 2006-08-15 18:15 Rev.: 35050

Catch errors in bad input networks.

0 lines of code changed in 2 files:

callahan 2006-08-15 18:15 Rev.: 35049

minor cleanup

0 lines of code changed in 2 files:

callahan 2006-08-15 18:13 Rev.: 35048

Minor cleanup

2 lines of code changed in 1 file:

guilkey 2006-08-15 15:48 Rev.: 35047

Fix a bug related to using burn models with implicit ICE. Needed to
renormalize the massExchange term by cell volume.

8 lines of code changed in 1 file:

mjc 2006-08-15 14:33 Rev.: 35046

remove dead code, clean out in prep for rewrite

66 lines of code changed in 27 files:

callahan 2006-08-15 14:16 Rev.: 35045

Clean up references to msg_stream_

15 lines of code changed in 13 files:

luitjens 2006-08-15 12:42 Rev.: 35038

Stats are now computed in doubles instead of integers.

4 lines of code changed in 1 file:

luitjens 2006-08-15 12:40 Rev.: 35036

Removed debug output

0 lines of code changed in 1 file:

callahan 2006-08-15 11:44 Rev.: 35035

Minor cleanup, add some optimizations.

0 lines of code changed in 2 files:

worthen 2006-08-15 10:47 Rev.: 35034

Fix really bad copy data (fixes neg int-eng-l) bug

1 lines of code changed in 1 file:

dav 2006-08-14 14:47 Rev.: 35027

Fix fortran underscore compatibility problem on ALC

29 lines of code changed in 2 files:

worthen 2006-08-14 13:36 Rev.: 35024

Don't dilate on finest level if not generating another level, and compensate for trying to dilate (cells > 2) where there is no corner patch

36 lines of code changed in 2 files:

guilkey 2006-08-14 11:17 Rev.: 35022

Added requires for particle variables to scheduleFormHCQ and
scheduleFormHCStiffness

8 lines of code changed in 1 file:

xiongcw 2006-08-14 01:59 Rev.: 35021

use zeroNeumann BC for pFlag, instead of set_if_sym_BC

2 lines of code changed in 2 files:

xiongcw 2006-08-12 22:49 Rev.: 35019

minor bug fix: request one ghost cell for press_CC

2 lines of code changed in 2 files:

guilkey 2006-08-11 18:57 Rev.: 35016

Got rid of some unnecessary variables.

2 lines of code changed in 1 file:

xiongcw 2006-08-11 13:43 Rev.: 35011

Now user will have to specify the IdealGasConst in the input file

22 lines of code changed in 4 files:

mjc 2006-08-11 13:13 Rev.: 35010

coding standard changes (formatting)

0 lines of code changed in 4 files:

ayla 2006-08-11 12:52 Rev.: 35008

More SCIRun2 configure tweaks.

31 lines of code changed in 3 files:

worthen 2006-08-10 19:34 Rev.: 35004

Remove some output

0 lines of code changed in 1 file:

guilkey 2006-08-10 17:26 Rev.: 35002

Interpolate change in grid temperature to particles for the update, not
the grid temperature itself. Also, gStressFS is now saved on a per material
basis, along with an AllInOne material version of the composite stress.

This is only going to make the RT results worse...

22 lines of code changed in 1 file:

worthen 2006-08-10 14:49 Rev.: 35000

Get finalizeTimestep to work with from-another-taskgraph

24 lines of code changed in 3 files:

luitjens 2006-08-10 13:28 Rev.: 34997

Fixed Saftey Layer Code

121 lines of code changed in 1 file:

xiongcw 2006-08-09 16:26 Rev.: 34991

using min_mass = d_TINY_RHO*cell_vol, instead of just d_TINY_RHO

17 lines of code changed in 4 files:

jas 2006-08-09 14:09 Rev.: 34989

Delete the newly created externalHeatFlux labels.

3 lines of code changed in 1 file:

jas 2006-08-09 14:01 Rev.: 34988

Add externalHeatFlux labels for both particles and grid.

13 lines of code changed in 2 files:

jas 2006-08-09 13:37 Rev.: 34984

Remove #if 0 section relating to the old way of doing the material problem
setup.

1 lines of code changed in 1 file:

guilkey 2006-08-09 11:38 Rev.: 34983

Set pressure BCs for pressNC. Previously, particles were feeling a pressure
gradient as they exited the domain (with GIMP and only in MPMICE) due to
incorrect nodal pressures at the outermost layer of nodes.

80 lines of code changed in 3 files:

luitjens 2006-08-09 08:57 Rev.: 34982

SFC generation no longer crashes when a processor has 0 elements.

Note: When a processor has 0 elements an incorrect curve may be formed
but the results will still be a linear ordering. A rewrite is required
to generate the correct curve and will be done after the site visit.

53 lines of code changed in 1 file:

ayla 2006-08-08 20:32 Rev.: 34981

Added Event class to EventService.

62 lines of code changed in 6 files:

ayla 2006-08-08 19:17 Rev.: 34980

Add friend class EventService.

187 lines of code changed in 1 file:

ayla 2006-08-08 19:14 Rev.: 34979

EventService updates, code cleanup.

597 lines of code changed in 12 files:

ayla 2006-08-08 19:12 Rev.: 34978

Use less restrictive config check.

0 lines of code changed in 2 files:

ayla 2006-08-08 19:10 Rev.: 34977

EventService spec updates: comments, cleanup, parent AbstractTopic interface.

456 lines of code changed in 4 files:

callahan 2006-08-08 17:20 Rev.: 34975

Fix the blend modes for VolumeSlicer. They were disabled for 1D colormaps (even though the colormaps were being pre-multiplied by alpha in anticipation of blending) and were the incorrect mode for 2D colormaps resulting in black halos. Fix by enabling blending and setting the mode properly to account for pre-multiplied alpha.

0 lines of code changed in 2 files:

harman 2006-08-08 17:04 Rev.: 34974

Ignore bulletproofing & exceptions if a timestart has already been requested.
Let the simulation get to the bottom of the timestep so a restart can occur.

61 lines of code changed in 7 files:

callahan 2006-08-08 14:23 Rev.: 34971

Change the ChangeFieldBounds variable that keeps track of the widget scale to 'real-scale'. 'scale' was being used to determine if the widget had been edited by hand rather than keep track of the box scale. Using it to keep track of the box scale caused the module to no longer properly track if the widget had been edited by hand and caused automatic update problems. Separating the variables out fixes this, but may cause networks built between now and r34794 (Jul 14) to contain the wrong scale if they were edited by hand.

0 lines of code changed in 2 files:

worthen 2006-08-08 14:15 Rev.: 34968

Use e-15 instead of e-6 as epsilon for grid corner comparisons

7 lines of code changed in 1 file:

ayla 2006-08-08 14:07 Rev.: 34967

Remove deprecated Babel compile option.

0 lines of code changed in 2 files:

ashwinds 2006-08-08 13:37 Rev.: 34966

EventService prototype

1001 lines of code changed in 13 files:

jas 2006-08-08 11:46 Rev.: 34964

Add HeatFlux physical boundary condition infrastructure.

359 lines of code changed in 9 files:

jas 2006-08-07 19:09 Rev.: 34960

Fix findFixedHCDOF() so that correct dofs are found when nodal mass is
zero.
Add routine findNeighbors which determines the neighboring dofs for a given
dof.

Add some comments to removeFixedDOFHeat().

72 lines of code changed in 4 files:

ayla 2006-08-07 19:08 Rev.: 34959

Add missing std:: for non-GUI build.

0 lines of code changed in 2 files:

jfsheph 2006-08-07 17:23 Rev.: 34958

finish initial implementation of ExtractHexSheet module useful in coarsening hexahedral meshes.

0 lines of code changed in 2 files:

worthen 2006-08-07 15:38 Rev.: 34953

Fix MPI refluxing problem (needs ghost cells for when fine patch border lines up with coarse patch)

18 lines of code changed in 1 file:

worthen 2006-08-07 14:57 Rev.: 34952

Missed a few files (command-line got messed up) - these are for outputting errors that happen when restarting a timestep

75 lines of code changed in 2 files:

worthen 2006-08-07 14:53 Rev.: 34951

Fix particle copies and output timesteps on timestep restartsGet MPM BNR regridding to work Fix refluxing range with BNRAlso disable 'dw->abortTimestep' with MPI since it does not workCCA/Components/DataArchiver

159 lines of code changed in 16 files:

luitjens 2006-08-07 14:07 Rev.: 34950

Clamped saftey layers within the domain boundaries

17 lines of code changed in 1 file:

harman 2006-08-07 12:02 Rev.: 34948

removed weed setBC_rho_micro, it's not used

1 lines of code changed in 3 files:

harman 2006-08-06 15:08 Rev.: 34944

-Only schedule computeModelSources on the finest level.

-cleaned up cout_doing
-some formatting

58 lines of code changed in 2 files:

jfsheph 2006-08-04 13:38 Rev.: 34943

add an option to turn off smoothing while keeping the MeshSmoothing module in a pipeline.

8 lines of code changed in 2 files:

ayla 2006-08-04 11:29 Rev.: 34938

Search for wxWidgets only if configuring SCIRun2.

92 lines of code changed in 2 files:

callahan 2006-08-04 11:24 Rev.: 34937

Minor cleanups, use new port handling functions

85 lines of code changed in 1 file:

kuzimmer 2006-08-03 18:47 Rev.: 34930

more features

323 lines of code changed in 4 files:

kuzimmer 2006-08-03 16:27 Rev.: 34929

moving files for modules that are no longer working. Leave a 'broken' version in case someone wants to revive them later.

214 lines of code changed in 8 files:

borodai 2006-08-03 12:05 Rev.: 34927

Put accidentally removed low bound check for variance back

3 lines of code changed in 1 file:

harman 2006-08-03 09:18 Rev.: 34913

backed out debugging code that was accidentally committed.

0 lines of code changed in 1 file:

harman 2006-08-03 09:08 Rev.: 34912

more descriptive negative specific volume warning

12 lines of code changed in 1 file:

harman 2006-08-03 08:53 Rev.: 34911

excess cout

0 lines of code changed in 3 files:

borodai 2006-08-02 15:52 Rev.: 34908

Added ability to save normalized scalar variance and heat loss

68 lines of code changed in 5 files:

harman 2006-08-02 14:38 Rev.: 34907

Bogus patch constructor:
- the low and high cell indices = IntVector(processor,level,-9)

2 lines of code changed in 1 file:

ayla 2006-08-02 13:31 Rev.: 34906

Remove prematurely added unit testing directory.

0 lines of code changed in 1 file:

borodai 2006-08-02 11:32 Rev.: 34905

Force petsc to use absolute tolerance

1 lines of code changed in 1 file:

ayla 2006-08-01 18:01 Rev.: 34904

Merge GUI, PIDL changes.

5304 lines of code changed in 215 files:

xiongcw 2006-08-01 16:00 Rev.: 34902

Unsteady_Burn model

1047 lines of code changed in 5 files:

xiongcw 2006-08-01 15:58 Rev.: 34901

bug fix and code clean

67 lines of code changed in 2 files:

ayla 2006-08-01 14:55 Rev.: 34898

Remove files with misspelled names.

0 lines of code changed in 2 files:

worthen 2006-08-01 13:22 Rev.: 34897

Remove Hypre 1.9 check from configure files

6 lines of code changed in 5 files:

harman 2006-08-01 12:57 Rev.: 34896

removed support for pre hypre-1.9

5 lines of code changed in 7 files:

ayla 2006-08-01 09:48 Rev.: 34893

Move CCA/Comm sources to PIDL.

6966 lines of code changed in 107 files:

ayla 2006-08-01 09:45 Rev.: 34892

Replace Qt with wxWidgets GUI.

15285 lines of code changed in 230 files:

July 2006 »

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