August 2014 Commit Log

Number of Commits:
115
Number of Active Developers:
13
ahumphrey 2014-08-30 23:05 Rev.: 52377

Remove REDSTORM artifacts.

14 lines of code changed in 32 files:

guilkey 2014-08-30 15:03 Rev.: 52375

Formatting improvements.

53 lines of code changed in 2 files:

guilkey 2014-08-30 12:13 Rev.: 52374

Minor formatting, getting rid of tabs and alignment

7 lines of code changed in 1 file:

awabboud 2014-08-29 13:25 Rev.: 52369

Clean up warnings

0 lines of code changed in 1 file:

awabboud 2014-08-29 10:34 Rev.: 52368

comment this to fix building

5 lines of code changed in 1 file:

awabboud 2014-08-29 10:19 Rev.: 52367

add function to fix compile problem

4 lines of code changed in 2 files:

awabboud 2014-08-29 10:09 Rev.: 52366

Add in a graviational body force and the fluid phase drag model to new Arches particle models

648 lines of code changed in 6 files:

harman 2014-08-29 09:27 Rev.: 52365

Fall out from debugging Tony's BC commit
ICE/BoundaryCond:
minor formatting changes to SCI_DEBUG calls.

MPM/MPMBoundCond.cc:
Added SCI_DEBUG calls
added formatting dividers, vertical spacing,....etc.

102 lines of code changed in 5 files:

mhomel 2014-08-28 19:02 Rev.: 52364

Added input error checking, scaling of elastic properties with disaggregation (timestep control).
Also moved computation of sqrt(3k/2g) and limit paramters out of deep loops for significant
efficiency gain.

201 lines of code changed in 2 files:

derekhar 2014-08-28 14:56 Rev.: 52362

Fixed bug for swirl boundary conditions. RMCRT input files where changed because temperature is not available on all levels.

36 lines of code changed in 1 file:

jsutherland 2014-08-28 13:18 Rev.: 52360

minor cleanup

10 lines of code changed in 1 file:

tsaad 2014-08-27 19:23 Rev.: 52359

kill the virus that is causing the buildbot to fail. This complements my previous commit.

1 lines of code changed in 1 file:

jthornoc 2014-08-27 16:44 Rev.: 52358

**Warning: Answer will change **
Derek and Jeremy making this commit:

Added bulletproofing for boundary temperatures in arches.
Radiation models including Discrete-Ordinates (DO) and Reverse-Monte-Carlo-Ray-Tracing (RMCRT) now are passed a new temperature variable called "radiation_temperature".
This new variable is a copy of temperature with modified boundary conditions, consistent with DO and RMCRT radiation models.
This is fixing a known bug where the temperature in the boundary conditions for inlets and outlets was incorrect for radiation.
The cell-centered variable "radiation_temperature" can be set in input files using Dirichlet, Neumann, and Tabulated boundary conditions.
ForcedDirichlet is applied for in place of Dirichlet for variable "radiation_temperature". This commit is expected to break all radiation RTests.

429 lines of code changed in 9 files:

tsaad 2014-08-27 11:18 Rev.: 52357

here's another shot at fixing the boundary condition geometry objects. This is supposed to fix the leak. Note that the MPMICE burners may still fail.

22 lines of code changed in 3 files:

tsaad 2014-08-27 10:33 Rev.: 52356

remove a virus from the ParticlesHelper et al. This had to do with yesterday's commit to deal with multiple materials.

36 lines of code changed in 5 files:

harman 2014-08-27 09:59 Rev.: 52355

OnTheFlyAnalysis/momentumAnalysis.*
- added contributions from viscous fluxes and pressure forces.
- major refactor/rework and simplification.

puda/ICE_momentum.cc
- change file output format

ups_spec
- momentumAnalysis no longer require the user to define label names.
Those are hard coded. If Arches & Wasatch users want to use this they should talk to me,
I'll add varLabels for those components

397 lines of code changed in 4 files:

tsaad 2014-08-27 09:42 Rev.: 52354

add a method to create memory windows that are particularly suited for Masks. This is needed as we transition into the new nebo boundary conditions that uses SpatialMasks.

32 lines of code changed in 3 files:

harman 2014-08-27 09:13 Rev.: 52353

schedule timeAdvance()
- added diagnostic task scheduleTotalParticleCount(), currently commented out.

3 lines of code changed in 1 file:

jsutherland 2014-08-27 07:31 Rev.: 52352

Formatting fixes; documentation fixes.

33 lines of code changed in 5 files:

mhomel 2014-08-26 20:37 Rev.: 52351

Added support for disaggregation strain initialization to define a continuous variable density jet, also fixed eve to use defgrad_new and fixed comments

87 lines of code changed in 2 files:

jthornoc 2014-08-26 14:50 Rev.: 52350

Derek and Jeremy:

Update swirl to be consistent with BC abstraction.

8 lines of code changed in 1 file:

ahumphrey 2014-08-26 13:14 Rev.: 52349

Provide more descriptive message for level of MPI thread suport.

2 lines of code changed in 1 file:

tsaad 2014-08-26 10:17 Rev.: 52348

change some of the private members in the ParticlesHelper et al. to account for multiple materials.

49 lines of code changed in 4 files:

tsaad 2014-08-26 09:51 Rev.: 52347

use the UintahPatchContainer to pass the patch around to expressions where possible. remove some un-necessary set_patch function calls.

26 lines of code changed in 14 files:

tsaad 2014-08-26 08:52 Rev.: 52346

Revert "delete BCGeom objects from patches that they don't belong to. This gives us an extra level of security against using empty boundary iterators."

This reverts commit dbd3c523046bcc8ac5adf4d626b0aacab7fb838d.

3 lines of code changed in 3 files:

mhomel 2014-08-25 15:19 Rev.: 52345

Added support for variability. "coher" is now passed through functions and used to perturb peakI1.

207 lines of code changed in 2 files:

tsaad 2014-08-25 13:38 Rev.: 52344

delete BCGeom objects from patches that they don't belong to. This gives us an extra level of security against using empty boundary iterators.

21 lines of code changed in 3 files:

tsaad 2014-08-25 13:00 Rev.: 52343

1. Fix memory leak in ParticlesHelper.
2. Allow BCData to return a pointer to the BCValues to avoid a deep copy (which has caused another memory leak). getBCValues now returns a const pointer to the bc values. cloneBCValues is now used to indicate a deep copy is taking place.

Thanks to Jeremy for catching these leaks. This should fix the memory leaks in the Arches RT.

32 lines of code changed in 6 files:

mhomel 2014-08-25 00:29 Rev.: 52342

modified Arenisca3 to improve speed, using fast approximate functions for certain pow and exp and a lookup table

1672 lines of code changed in 3 files:

mhomel 2014-08-23 03:04 Rev.: 52341

Added rate dependence, cleaned up the code.

160 lines of code changed in 2 files:

dav 2014-08-22 14:43 Rev.: 52338


This is a very minor commit.

M Core/Grid/Level.h
M Core/Parallel/Parallel.h

- Fix indentation.

M Core/Grid/BoundaryConditions/BCGeomBase.h
M Core/Grid/BoundaryConditions/BCGeomBase.cc

- Fix white space, line up variables.
- Remove 'const' from several return values as it doesn't make sense and icc gives a warning.
- All arguments for determineIteratorLimits() should be const (as none of them change or return anything).
- Remove superfluous ;s after some function definitions.
- Plase "template<>" on the preceding line from "class" per standard and consistency.

26 lines of code changed in 4 files:

jsutherland 2014-08-22 14:01 Rev.: 52337

clean up a few warnings

4 lines of code changed in 3 files:

jsutherland 2014-08-22 13:35 Rev.: 52336

- Make PrimVar GPU runnable
- misc. cleanup

12 lines of code changed in 3 files:

awabboud 2014-08-22 13:34 Rev.: 52335

Add in the soruce wrapper for CQMOM in order to utilize any arbitrary IC soruce term.

433 lines of code changed in 6 files:

jthornoc 2014-08-22 12:33 Rev.: 52334

Register new varlabels in the problemSetup phase.

212 lines of code changed in 39 files:

harman 2014-08-22 11:20 Rev.: 52333

Global:
changed variable name matl_jim -> matl

Added a puda option to perform a conntrol volume momentum analysis on ICE udas. This needs further
testing.

437 lines of code changed in 27 files:

awabboud 2014-08-22 10:04 Rev.: 52332

adjust the drag model to be useable in test 1/2D cases.

8 lines of code changed in 1 file:

dav 2014-08-21 15:38 Rev.: 52331

M CCA/Components/Schedulers/SchedulerFactory.cc

- Actually print out the full error this time. :)

M Core/Parallel/Parallel.h
M Core/Parallel/Parallel.cc

- Moved (to the .h file) and renamed a number of (static) varaibles
that should be class variables (and should not just be global
variables in the .cc file). I would have liked to do this to all of
them, but worldComm_ is of type MPI_Comm which is a fancy typedef,
and if I move it to the .h file, then I have to #include mpi.h
in that file, which makes a lot of files now dependent on mpi.h,
so I'd like to avoid that.

131 lines of code changed in 3 files:

jsutherland 2014-08-20 21:34 Rev.: 52330

Fix another warning; more formatting changes.

36 lines of code changed in 3 files:

jsutherland 2014-08-20 21:10 Rev.: 52329

Clean up a few warnings (comparison of signed/unsigned) on gcc and reformat some particle stuff

121 lines of code changed in 3 files:

tsaad 2014-08-20 14:51 Rev.: 52328

add some comments to the particle addition code

14 lines of code changed in 1 file:

tsaad 2014-08-20 12:50 Rev.: 52327

fix typo in the timeadvance expression

0 lines of code changed in 1 file:

tsaad 2014-08-20 10:38 Rev.: 52326

automatically add px, py, pz to the list of needed boundary conditions. disallow adding the position vector and pid to that list

21 lines of code changed in 2 files:

jthornoc 2014-08-20 10:19 Rev.: 52325

Add a new lagrangian particle test.

91 lines of code changed in 1 file:

jthornoc 2014-08-20 10:19 Rev.: 52324

Use Tony\'s new particle helper BC addition.

Change back a function name for particle in the TaskInterface.

Add a couple new input files.

15 lines of code changed in 11 files:

jsutherland 2014-08-20 09:56 Rev.: 52323

Clean up some doxygen warnings.

11 lines of code changed in 3 files:

jsutherland 2014-08-20 09:56 Rev.: 52322

Changes to clean up TimeAdvance and also make it GPU ready.

47 lines of code changed in 2 files:

guilkey 2014-08-20 08:20 Rev.: 52320

Removed some commented out debugging code, fixed some formatting, replaced some divides by multiplies, etc.

12 lines of code changed in 1 file:

tsaad 2014-08-19 16:34 Rev.: 52319

allow BCGeomBase to store, compute, and return its surface area on the current patch. No reductions yet to compute total surface area across patches.

51 lines of code changed in 5 files:

dav 2014-08-19 14:32 Rev.: 52317


A number of clean ups for Vulcan (LLNL - BGQ machine). Most
importantly, fixed memory usage reporting (see ProcessInfo.cc).

M CCA/Components/SimulationController/AMRSimulationController.h
M CCA/Components/SimulationController/AMRSimulationController.cc

- Added white space, removed tabs, line up params, etc.

M CCA/Components/SimulationController/SimulationController.cc

- Moved toHumanUnits() to ProcessInfo so it can be used by others.
- Line up variables, add white space.
- Consistent (correct) capitalization/punctuation of some comments.

M CCA/Components/LoadBalancers/SingleProcessorLoadBalancer.h
M CCA/Components/LoadBalancers/SingleProcessorLoadBalancer.cc

- inNeighborhood() did not have the same declaration as its parent
(superclass)... removed "const MaterialSubset*" to fix this... not
sure how this worked before.
- White space.

M CCA/Components/LoadBalancers/LoadBalancerCommon.h

- Add "d_" to several class variables to be consistent and conform to coding standard.
- Removed extra (unnecessary) level of indentation.
- White space, line up variables.

M CCA/Components/LoadBalancers/LoadBalancerCommon.cc

- Add "d_" to several class variables to be consistent and conform to coding standard.
- White space.

M CCA/Components/Schedulers/OnDemandDataWarehouse.cc

- Alphabetize #includes to more easily determine what is included.
- White space, line up variables.

M CCA/Components/Schedulers/UnifiedScheduler.cc

- Minor white space, coding standard update.

M CCA/Components/Schedulers/MPIScheduler.cc

- Minor white space fix.

M CCA/Components/Schedulers/SchedulerCommon.cc

- ProcessInfo GetMemoryResident() renamed with lowercase 'g' to match coding standard.
- Added processor rank to commented out memory usage print statement.

M CCA/Components/Arches/Radiation/RadPropertyCalculator.h

- Alphabetize #includes, remove superfluous ;s, remove tabs, line up functions/variables.

M Core/OS/ProcessInfo.h
M Core/OS/ProcessInfo.cc

- Fixed (added) BGQ memory usage querying code. Previously, it was
calling the generic linux version, and trying to open
/proc/<pid>/status to get memory info. On BGQ machines, this file
does not exist (except on the I/O node - where, while it exists,
it does not have valid information in it). In the generic linux
version, if the file fails to open, then an error is NOT thrown,
and 0 is returned... most likely we should fix this so that it
throws an error...
Note, the code for using the "mallinfo" (for BGQ) version of memory
checking was also added to this file, but is commented out and not
used because it uses an integer as the return variable and thus
does not correctly handle systems with more than 2 GB of memory.

- Coding standard updates.
- Moved toHumanUnits() here.
- Use lowercase letter for first letter in function names to be consistent and follow standard.

M Core/Parallel/Parallel.cc
M Core/Thread/Thread_pthreads.cc

- Minor white space, capitalization/punctuation.

M StandAlone/sub.mk

- For static builds, need Wasatch 3P libs to link.

M StandAlone/sus.cc

- Alphabetize #includes.



441 lines of code changed in 21 files:

tsaad 2014-08-19 13:34 Rev.: 52316

fix bug when initializing particle variable not specified through the input boundary conditions

1 lines of code changed in 1 file:

tsaad 2014-08-19 10:16 Rev.: 52315

improvements and cleanup of the particle addition code.

28 lines of code changed in 1 file:

tsaad 2014-08-18 21:03 Rev.: 52314

(1) improve the particle addition algorithm.
(2) initialize added particle variables for which no boundary condition was specified
(3) add a regression test for particle addition through the boundaries

29 lines of code changed in 3 files:

tsaad 2014-08-18 13:50 Rev.: 52313

This commit provides support for adding particles through boundaries using the ParticlesHelper and classic Uintah BC machinery. You will need to invoke two key functionalities in the ParticlesHelper:
(1) ParticlesHelper::needs_boundary_condition: a static function call to add the variables that require a boundary condition. These are the transported particle variables such as velocity, mass, size...
(2) ParticlesHelper::schedule_add_particles: make sure you call that AFTER ParticlesHelper::schedule_particle_relocation. This will add particles on a boundary as specified through the input file. The particles are placed randomly in the first interior cell of the domain, at the required boundary (circle, rectangle, face...).
We currently only support constant boundary values for the remaining particle variables. Support for other distribution will follow in the near future as I'd like it to provide a unified and easy to use interface through the input file.

326 lines of code changed in 18 files:

jthornoc 2014-08-16 20:39 Rev.: 52311

Adding a debug help.

21 lines of code changed in 2 files:

colovos 2014-08-16 11:22 Rev.: 52310

changed rate dependence slightly and cleaned up code. important to note the trial stress is now calculated at sthe quasistatic stress plus the stress increment (from strain rate)

112 lines of code changed in 3 files:

harman 2014-08-15 13:35 Rev.: 52309

Removed a label that is no longer part of the ray trace kernel.

0 lines of code changed in 1 file:

jthornoc 2014-08-15 13:13 Rev.: 52308

To keep me sane: Look for the end of the iterators rather than commenting out blocks of
code.

50 lines of code changed in 2 files:

harman 2014-08-15 10:17 Rev.: 52307

added printTask() to radiometer

5 lines of code changed in 1 file:

ahumphrey 2014-08-14 14:54 Rev.: 52306

Throw exception if a non-threaded scheduler is specified in the UPS file and "-nthreads <n>" is used on the command line.

5 lines of code changed in 1 file:

dav 2014-08-14 14:30 Rev.: 52305


All variables that do not change and member functions that do not
change class data should be made const. In this checkin, a number of
things passed into the Schedulers can be made const (the 'output' port
variable is the main one here).

Made a number of minor cleanups including whitespace, tab removal,
coding standard, etc.

M CCA/Components/DataArchiver/DataArchiver.h

- Clean up layout of functions.
- Make const all functions that don't chance the class' data.
- Remove superfluous ;s.

M CCA/Components/DataArchiver/DataArchiver.cc

- Add const to functions updated in .h file.
- Minor coding standard, white space, readability cleanups.

M CCA/Components/ReduceUda/UdaReducer.h
M CCA/Components/ReduceUda/UdaReducer.cc

- Line up variables for better readability.
- Pass strings as 'const &', instead of copying them.

M CCA/Components/Schedulers/SchedulerFactory.h
M CCA/Components/Schedulers/SchedulerFactory.cc
M CCA/Components/Schedulers/DynamicMPIScheduler.h
M CCA/Components/Schedulers/DynamicMPIScheduler.cc
M CCA/Components/Schedulers/SingleProcessorScheduler.h
M CCA/Components/Schedulers/SingleProcessorScheduler.cc
M CCA/Components/Schedulers/UnifiedScheduler.h
M CCA/Components/Schedulers/UnifiedScheduler.cc
M CCA/Components/Schedulers/MPIScheduler.h
M CCA/Components/Schedulers/MPIScheduler.cc
M CCA/Components/Schedulers/MessageLog.h
M CCA/Components/Schedulers/MessageLog.cc
M CCA/Components/Schedulers/SchedulerCommon.h
M CCA/Components/Schedulers/SchedulerCommon.cc

- Pass 'Output' port variable as const as it is not used to change the output.
- Line up variables for better readability, add some white space, remove spurious tabs.

M CCA/Ports/Output.h

- Add 'const' to all functions that don't change the class' data.
- White space / Readability

M StandAlone/sus.cc

- Clarify MAX_THREADS error message.

- It is unclear to me how the specification of number of threads and
<scheduler> work together... ie which one gets precedence. When I
figure it out, I will fix this further.

234 lines of code changed in 27 files:

tsaad 2014-08-14 12:31 Rev.: 52304

fix the failing wasatch tests on the RT machine.

15 lines of code changed in 1 file:

harman 2014-08-13 17:16 Rev.: 52303

Arches now sets the boundary conditions on temperature and abskg for single level problems.

For multi-level problems the boundary conditions are set by RMCRT.

7 lines of code changed in 1 file:

jthornoc 2014-08-13 14:15 Rev.: 52302

Hack failure: Comment out the use of bad iterators when lagrangian
particles are not in use.

6 lines of code changed in 1 file:

jthornoc 2014-08-13 13:26 Rev.: 52301

* Add particle size and associated update. Note that currently the
Lagrangian implementation requires at least a size, velocity, and
position for it to work.

* Hack the initialization ordering for the lagrangian particles.
Hopefully this can be changed.

* update input file and spec.

426 lines of code changed in 15 files:

tsaad 2014-08-13 12:36 Rev.: 52300

Add support for specifying boundary condition on Particles through the Uintah BC interface. This will set the stage for specifying particle injection through boundaries.
(1) Add appropriate ups_spec for Particle boundary conditions
(2) Add a struct to BCGeomBase to store particle-related specification
(3) propagate this information through Wasatch
(4) Add support for inelastic and partially elastic walls in Wasatch

181 lines of code changed in 11 files:

mhomel 2014-08-13 10:13 Rev.: 52299

added .h file to go with last night's changes

12 lines of code changed in 1 file:

jthornoc 2014-08-13 09:59 Rev.: 52298

* move operator creation out of Arches.cc and into Operators.cc
* Added a couple new input files.
* More work on the Lagrangian particle stuff, including velocity and
position updates.

955 lines of code changed in 21 files:

jthornoc 2014-08-13 09:59 Rev.: 52297

Initial import of Lagrangian particle support using Tonys ParticleHelper
class. Still more work to be done.

1057 lines of code changed in 15 files:

mhomel 2014-08-12 23:18 Rev.: 52296

added support for nonlinear drucker prager, changed subcyle input parameter, and cleaned up shear limit code

130 lines of code changed in 1 file:

awabboud 2014-08-11 15:48 Rev.: 52295

Fix drag model loops

5 lines of code changed in 1 file:

jsutherland 2014-08-11 15:47 Rev.: 52294

Bug fix for particle field wrapper. Thanks to Jeremy for uncovering this!

7 lines of code changed in 1 file:

awabboud 2014-08-11 15:43 Rev.: 52293

Redo naming conventino for CQMOM nodes 1->N to 0->N-1 to be consistent with DQMOM. This will break the RT.

5 lines of code changed in 1 file:

awabboud 2014-08-11 15:11 Rev.: 52292

Add in new code for a generalized particle drag model using nebo syntax. Add a new CC double for each of the u,v,w velocities to use these without theCCVelocity vector

452 lines of code changed in 10 files:

tsaad 2014-08-11 13:59 Rev.: 52291

improve algorithm for random particle initialization in arbitrary shapes. This will break many particles RT.

22 lines of code changed in 2 files:

tsaad 2014-08-11 13:17 Rev.: 52290

fix a bug when wrapping Uintah particle fields as SpatialOps particle fields. Thanks Jeremy!

7 lines of code changed in 1 file:

harman 2014-08-11 10:33 Rev.: 52289

- added command line options and bulletproofing

- outputing instantaneous and averaged forces to text files

185 lines of code changed in 1 file:

tsaad 2014-08-08 10:15 Rev.: 52287

cleanup a few things in RadiationSource

206 lines of code changed in 2 files:

tsaad 2014-08-08 10:08 Rev.: 52286

add more documentation to the ParticlesHelper at the request of Dr. Thornock. More to come soon.

52 lines of code changed in 1 file:

harman 2014-08-07 16:15 Rev.: 52285

Heavy construction. It works for cylinder in crossflow. Computed forces need to be validated.

155 lines of code changed in 1 file:

awabboud 2014-08-07 15:53 Rev.: 52284

Implement second order spatial scheme for CQMOM transport.

238 lines of code changed in 2 files:

jthornoc 2014-08-07 14:53 Rev.: 52283

Missed a comment.

1 lines of code changed in 1 file:

jthornoc 2014-08-07 14:27 Rev.: 52282

Adding a particle model factory.
Particle model tasks can now be added to evaluate dphi/dt type terms
using the new Arches task interface including the Nebo/SO syntax. A
simple rate term was added as an example.

Note that the rate term currently is looping over environments. In the
lagrangian particle case, I assume the total number of "environments"
will be = 1. This effectively means that the task will evaluate all
model terms across all environments/particles rather than having a
single task/environment.

410 lines of code changed in 9 files:

guilkey 2014-08-07 13:43 Rev.: 52281

Change the fomatting/readability of the prescribed deformation code.

31 lines of code changed in 1 file:

harman 2014-08-07 12:21 Rev.: 52280


Moved BC bulletproofing code from problemSetup to new function.
The component can elect to not call this.

The flag d_onOff_setBC can now be set by the component and no longer a input file option.
For single level RMCRT problems the component should set all BCs and you want to set this
to be false, for multi-level you *may* want it be true.


Arches:RMCRT.cc
- added single level rmcrt algorithm to sched_computeSource()

Updated ups spec


81 lines of code changed in 5 files:

tsaad 2014-08-06 12:23 Rev.: 52279

A much faster way to find particles near boundaries.

46 lines of code changed in 2 files:

jthornoc 2014-08-06 11:00 Rev.: 52278

New scalar solver now using Tony's flux limiter.

145 lines of code changed in 4 files:

u0407585 2014-08-06 10:56 Rev.: 52277

Minor update to the math done in the wall heat transfer model.

0 lines of code changed in 2 files:

mhomel 2014-08-05 17:43 Rev.: 52275

Changed the error checking for much faster and more reasonable response as evp nears p3 limit.

54 lines of code changed in 1 file:

derekhar 2014-08-05 09:21 Rev.: 52274

Fixes bug for non-cubic cells. This recommits the change in commit #52211, and extends it to the float version of RMCRT.

6 lines of code changed in 2 files:

harman 2014-08-05 08:06 Rev.: 52273

More work on analysis module. Added post processing script to compute
the dM/dt and the forces on the control volume.


301 lines of code changed in 2 files:

derekhar 2014-08-04 19:22 Rev.: 52272

A reversion to version 52201 for RMCRT files Ray.cc and floatRMCRT/Ray.cc.

70 lines of code changed in 2 files:

colovos 2014-08-04 17:43 Rev.: 52271

Updated rate dependence section to remove duplicated code as well as some general clean up. Last commit for the day

75 lines of code changed in 1 file:

mhomel 2014-08-04 16:52 Rev.: 52269

efficiency changes to Arenisca 3

41 lines of code changed in 2 files:

jthornoc 2014-08-04 14:44 Rev.: 52268

Adding an example input file.

Adding upwind interpolant example for Nebo scalar thanks to Tony.

4 lines of code changed in 1 file:

jthornoc 2014-08-04 14:44 Rev.: 52267

Get the correct convective flux.
Remove a bad spec.

1 lines of code changed in 1 file:

jthornoc 2014-08-04 14:44 Rev.: 52266

Turn on upwinding in the scalarRHS function.

Remove the 2D sine/cos initialization from the WaveFormInit task since
it is designed for 1D initialization.

123 lines of code changed in 5 files:

derekhar 2014-08-04 12:01 Rev.: 52265

Fixed bug, causing DO-RMCRT regression test to fail. The bug was caused by an incorrect sequence of code in the updatesumI function.

18 lines of code changed in 1 file:

mhomel 2014-08-04 10:06 Rev.: 52264

Fixed initial pore pressure bug and deleted rotation[idx] and f_trial_step[idx] terms

4 lines of code changed in 1 file:

mhomel 2014-08-04 09:05 Rev.: 52263

Significant changes to the Arenisca3 code including an implementation of the strain-to-yield fluid model.

1043 lines of code changed in 2 files:

colovos 2014-08-04 05:26 Rev.: 52262

Code cleaned up. Alignment issues corrected and unnecessary comments removed. MASSIVE number of changed lines but NO LOGIC CHANGES

534 lines of code changed in 1 file:

colovos 2014-08-04 03:46 Rev.: 52261

Removed temporarily allocated variables that are no longer needed

20 lines of code changed in 1 file:

colovos 2014-08-04 02:34 Rev.: 52260

added the 3Kby2G fix with temporary preprocessor directive to turn on and off

45 lines of code changed in 1 file:

guilkey 2014-08-02 16:48 Rev.: 52259

Delete some commented out spew of Hamid's. Still not sure why there is a conditional
with the same code in both branches...

4 lines of code changed in 1 file:

guilkey 2014-08-02 15:25 Rev.: 52258

Remove comment about code possibly being incorrect.

2 lines of code changed in 1 file:

guilkey 2014-08-02 11:15 Rev.: 52257

Remove all instances of allocateCMDataAdd from the various Arensica files. This was
removed from all other models a while back.

0 lines of code changed in 6 files:

ahumphrey 2014-08-01 15:41 Rev.: 52254

Remove Heirarchical and BNR regridder and supporting classes, tests, etc.

* NOTE: It has been shown these do not scale, and in the case of ICE these regridders have undesired side effects WRT fine level solution, and in fact are disallowed by ICE.

* The only input file found to be using the Heirarchical regridder was /inputs/Examples/wave.ups (Similar to AMRWaveEquation test problem from Chombo), and has been changed to have the appropriate <Regridder> attributes.

* This commit also enables clean support for GPUPerPatch variables need by Wasatch with CUDA enabled.

1011 lines of code changed in 50 files:

awabboud 2014-08-01 15:18 Rev.: 52252

Expand CQMOM abstraction to allow for any number of internal coordinates. After M=5 nodes per additional coordinate are limited to 1.

219 lines of code changed in 3 files:

awabboud 2014-08-01 12:49 Rev.: 52250

Update checkign the required number of moments.

15 lines of code changed in 1 file:

tsaad 2014-08-01 10:54 Rev.: 52249

add regression test that exercises the particle wall bc in all three directions

2 lines of code changed in 1 file:

tsaad 2014-08-01 10:42 Rev.: 52248

add 3 regression tests that exercise the particle wall bc

6 lines of code changed in 1 file:

u0407585 2014-08-01 09:20 Rev.: 52247

commented out print statement

12 lines of code changed in 1 file:

awabboud 2014-08-01 09:14 Rev.: 52246

Fix the seg fault for the 4D cqmom.

2 lines of code changed in 1 file:

wyxpuma 2014-08-01 08:49 Rev.: 52245

to update WallHT model and add the emissivity part

21 lines of code changed in 3 files:

wyxpuma 2014-08-01 08:18 Rev.: 52244

Martin update the wallHT model

6 lines of code changed in 1 file:

July 2014 »

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