Designed especially for neurobiologists, FluoRender is an interactive tool for multi-channel fluorescence microscopy data visualization and analysis.
Deep brain stimulation
BrainStimulator is a set of networks that are used in SCIRun to perform simulations of brain stimulation such as transcranial direct current stimulation (tDCS) and magnetic transcranial stimulation (TMS).
Developing software tools for science has always been a central vision of the SCI Institute.
 Madison Cooley

Madison Cooley - Graduate Research Assistant

WEb 3720-01
This email address is being protected from spambots. You need JavaScript enabled to view it.
supervisor Dr. Mike Kirby, Dr. Shandian Zhe


  • B.S. in Computer Science (Big Data concentration) with minors in both Mathematics and Statistics from the University of Wyoming
  • Prior experience researching combinatorial graph algorithms for gene module detection and practical applications of the Structural Rounding framework for efficient problem solutions on graphs close to a structural class

Current Responsibilities

  • Graduate Research Assistant working with Dr. Mike Kirby and Dr. Shandian Zhe on physics informed machine learning
  • Ph.D. student in Computing - Data Management and Analysis track

Research Interests

  • Physics informed machine learning (PIML)
  • Bayesian learning methods