SCIENTIFIC COMPUTING AND IMAGING INSTITUTE
at the University of Utah

An internationally recognized leader in visualization, scientific computing, and image analysis

SCI Publications

2007


D. Nain, M. Styner, M. Niethammer, J.J. Levitt, M.E. Shenton, G. Gerig, A. Bobick, A. Tannenbaum. “Statistical Shape Analysis of Brain Structures Using Spherical Wavelets,” In Proceedings of the 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2007), IEEE Press, pp. 209--212. 2007.


O. Nemitz, T. Tasdizen, M. Rumpf, R.T. Whitaker. “Anisotropic Curvature Motion for Structure Enhancing Smoothing of 3D MR Angiography Data,” In Journal of Mathematical Imaging and Vision, Vol. 7, No. 3, pp. 217--229. 2007.
DOI: 10.1007/s10851-006-0645-2


E.P. Newren, A.L. Fogelson, R.D. Guy, R.M. Kirby. “Unconditionally Stable Discretizations of the Immersed Boundary Equations,” In Journal of Computational Physics, Vol. 222, No. 2, pp. 702--719. 2007.


E.P. Newren, A.L. Fogelson, R.D. Guy, R.M. Kirby. “Unconditionally Stable Discretizations of the Immersed Boundary Equations,” In Journal of Computational Physics, Vol. 222, No. 2, pp. 702--719. March, 2007.


T. Ochotta, C.E. Scheidegger, J. Schreiner, Y. Lima, R.M. Kirby, C.T. Silva. “A Unified Projection Operator for Moving Least Squares Surfaces,” SCI Institute Technical Report, No. UUSCI-2007-006, University of Utah, 2007.


L. Omberg, G.H. Golub, O. Alter. “A Tensor Higher-Order Singular Value Decomposition for Integrative Analysis of DNA Microarray Data From Different Studies,” In Proceedings of the National Academy of Sciences, Vol. 104, No. 47, Proceedings of the National Academy of Sciences, pp. 18371–-18376. November, 2007.
DOI: 10.1073/pnas.0709146104


R. Palmer, G. Gopalakrishnan, R.M. Kirby. “Semantics Driven Dynamic Partial-Order Reduction of MPI-based Parallel Programs,” In Proceedings of Parallel and Distributed Systems: Testing and Debugging (PADTAD), London, UK, Note: Awarded Best Paper, 2007.


S.G. Parker, S. Boulos, J. Bigler, A. Robison. “RTSL: a Ray Tracing Shading Language,” In In 2007 IEEE/Eurographics Symposium on Interactive Ray Tracing, pp. 149--160. 2007.


S.G. Parker, R. Armstrong, D. Bernholdt, T. Dahlgren, T. Epperly, J. Kenny, M. Krishnan, G. Kumfert, J. Larson, L.C. McInnes, J. Nieplocha, J. Ray, S. Shasharina. “Enabling Advanced Scientific Computing Software,” In CTWatch Quarterly, Vol. 3, No. 4, 2007.


V. Pascucci, G. Scorzelli, P.-T. Bremer, A. Mascarenhas. “Robust On-line Computation of Reeb Graphs: Simplicity and Speed,” In ACM Transactions on Graphics: ACM SIGGRAPH 2007 Papers, ACM Press, New York, NY, USA pp. 1057--1066. 2007.


S. Pervez, G. Gopalakrishnan, R.M. Kirby, R. Palmer, R. Thakur, W. Gropp. “Practical Model Checking Method for Verifying Correctness of MPI Programs,” In Recent Advances in Parallel Virtual Machine and Message Passing Interface - Proceedings of EuroPVM-MPI 2007, Paris, France, Vol. 4757/2007, pp. 344--353. 2007.


N.S. Phatak, Q. Sun, S.-E. Kim, D.L. Parker, R.K. Sanders, A.I. Veress, B.J. Ellis, J.A. Weiss. “Noninvasive Determination of Ligament Strain with Deformable Image Registration,” In Annals of Biomedical Engineering, Vol. 35, No. 7, pp. 1175--1187. February, 2007.


A.B. Porter, L. Healy, N.L. Foster, K.A. Josephs. “Compulsive Urination as a Presenting Symptom of Frontotemporal Dementia,” In European Journal of Neurology, Vol. 14, Note: Letter to the Editor, pp. e16--e17. 2007.


G.A. Preston, E.W. Anderson, C.T. Silva. “Effects of 10 Hz rTMS on Alpha Spectral Dynamics and Working Memory Performance,” In Proceedings of Neuroscience 2007 Poster Session, Note: Poster presentation., 2007.


D. Reed, C.R. Johnson. “CRA-NIH Computing Research Challenges in Biomedicine Workshop Recommendations,” Note: Computing Research Association (CRA), 2007.


N. Sadeghi, T. Tasdizen, N.L. Foster, A.Y. Wang, S. Minoshima, A.P. Lieberman.. “Automatic Classification of Alzheimers Disease vs. Frontotemporal Dementia: A Decision Tree Approach with FDG-PET,” SCI Institute Technical Report, No. UUSCI-2007-016, University of Utah, 2007.


C.E. Scheidegger, H.T. Vo, D. Koop, J. Freire, C.T. Silva. “Querying and Creating Visualizations by Analogy,” In Proceeding of IEEE Visualization 2007, pp. 1560--1567. 2007.


J.F. Shepherd. “Topologic and Geometric Constraint-Based Hexahedral Mesh Generation,” School of Computing, University of Utah, May, 2007.


J.F. Shepherd, C.R. Johnson. “Hexahedral Mesh Generation for Biomedical Models in SCIRun,” SCI Institute Technical Report, No. UUSCI-2007-008, University of Utah, 2007.


S. Shome, R.L. Lux, B.B. Punske, R.S. MacLeod. “Ischemic Preconditioning Protects Against Arrhythmogenesis Through Maintenance of Both Active as well as Passive Electrical Properties in Ischemic Canine Hearts,” In Journal of Electrocardiology, Vol. 40, No. 6 supp, pp. S150--S159. Nov-Dec, 2007.