March 2005 Commit Log

Number of Commits:
282
Number of Active Developers:
26
callahan 2005-03-31 17:56 Rev.: 29597

Fix HAVE_CBLAS const compilation error.

5 lines of code changed in 2 files:

mdavis 2005-03-31 15:22 Rev.: 29596

Bugfix #2576. Add usage comment for -commandname

1 lines of code changed in 1 file:

bigler 2005-03-31 15:20 Rev.: 29595

Changed cstdlib include to stdlib.h to let it compile on Irix systems. Added sgi_stl warning guards around STL includes.

4 lines of code changed in 1 file:

mdavis 2005-03-31 15:16 Rev.: 29594

Add back in -commandname option that was accidentally removed between 1.26 and 1.27

31 lines of code changed in 1 file:

callahan 2005-03-31 14:59 Rev.: 29593

Unfriend the helper functions that don't need to be friendly

18 lines of code changed in 2 files:

mdavis 2005-03-31 14:05 Rev.: 29592

Init global-scale to 1 if not set. Fixes loading when SCIRUN_DATA is not set.

2 lines of code changed in 1 file:

mdavis 2005-03-31 14:05 Rev.: 29591

Load default.settings if user decides to ignore dataset. Fixes case in BioFEM when user chooses to not load dataset

3 lines of code changed in 1 file:

harman 2005-03-31 13:38 Rev.: 29590

accumulateEnergySourceSink()
- heat conduction source: only grab data if you're going to use it.

16 lines of code changed in 1 file:

callahan 2005-03-31 13:08 Rev.: 29589

Fix race condition in Thread::parallel. Make all of the templated versions blocking (so that we don't dangle the stack pointer object). Call the function directly if nthreads == 1.

73 lines of code changed in 14 files:

callahan 2005-03-31 12:56 Rev.: 29588

Add newlines to end of files

3 lines of code changed in 2 files:

mjc 2005-03-31 12:24 Rev.: 29587

add method for forcing cosistent face ordering, ability to flip all faces, StandAlone program to do both, as well as create a test mesh with random faces flipped. regenerates edges and edge neighbor each flip, not worth it to be more local until get_edges doesnt walk all the faces for each edge.

209 lines of code changed in 4 files:

harman 2005-03-31 10:40 Rev.: 29586

re-ordered the main steps to reflect the truth.

12 lines of code changed in 2 files:

harman 2005-03-31 10:28 Rev.: 29585

added: computeThermoTransportProperties
update volume fraction
advecton of specific volume
Accumulate Sources
- In shear stress and conduction terms using vol_frac_FC computed
by the advection of vol_frac.

69 lines of code changed in 3 files:

callahan 2005-03-30 23:02 Rev.: 29584

minor cleanups

355 lines of code changed in 2 files:

harman 2005-03-30 18:54 Rev.: 29583

computeDelPressAndUpdatePress_CC()
- now computing vol_Frac(X,Y,Z)_FC which is needed by both the
scalarDiffusionOperator() and computeShearStress. The advection
of vol_frac_CC computes these quantities

accumulateMomentumSourcesSinks()
- using vol_frac(X,Y,Z)_FC inside of computeTau instead of sp_vol and rho_CC.

accumulateEnergySourcesSinks
- using vol_frac(X,Y,Z)_FC inside of scalarDiffusionOperator() instead of sp_vol and rho_CC.

67 lines of code changed in 1 file:

harman 2005-03-30 18:49 Rev.: 29582

accumulateEnergySourcesSinks_RF()
-vol_Frac(X,Y,Z)_FC ( computed by the advection of vol_frac)
is used in the scalarDiffusionOperator and in place of the upwinded
vol_frac business.

22 lines of code changed in 1 file:

harman 2005-03-30 18:45 Rev.: 29581

updated funcion call to scalarDiffusion() operator

31 lines of code changed in 4 files:

harman 2005-03-30 18:41 Rev.: 29580

ImplicitPressureSolve()
- The implicit pressure solve now modifies vol_frac(X,Y,Z)_FC. These
variables are needed by both the scalarDiffusion and shearStress operators.

18 lines of code changed in 1 file:

harman 2005-03-30 18:39 Rev.: 29579

updated the function prototypes

0 lines of code changed in 2 files:

harman 2005-03-30 18:38 Rev.: 29578

computeTau(X,Y,Z)
- cleaned up the iterator limits offsets when there are multiple patches.

3 lines of code changed in 1 file:

harman 2005-03-30 18:31 Rev.: 29577

Globally:

scalarDiffusionOperator() & computeTau(x,y,z) operators
- no longer using rho_CC and sp_vol_CC to compute vol_frac at the faces
- Now passing in vol_frac(X,Y,Z)_FC which is computed during the
advection of vol_frac.

82 lines of code changed in 1 file:

harman 2005-03-30 18:17 Rev.: 29576

removed old debugging models ---again

0 lines of code changed in 4 files:

allen 2005-03-30 16:39 Rev.: 29575

added a matrix tab so it will be optional even when a matrix is connected, fix a bug in the slider entry, made the iso qunatity range either exclusive (current default) or inclusive of the min and max

147 lines of code changed in 3 files:

allen 2005-03-30 15:51 Rev.: 29574

fixed missing merge code and change mpeg license message popup

11 lines of code changed in 1 file:

mdavis 2005-03-30 15:22 Rev.: 29573

Bug #2534: Use range widgets for row/col range selection. Update ranges when matrix changes

0 lines of code changed in 2 files:

mdavis 2005-03-30 15:21 Rev.: 29572

Bugfix #2534: Showmatrix row/col ranges now update correctly when input matrix changes.

0 lines of code changed in 2 files:

callahan 2005-03-30 15:13 Rev.: 29570

Don't use <limits>, not defined everywhere (fixes gcc 2.96 compile)

0 lines of code changed in 2 files:

callahan 2005-03-30 15:09 Rev.: 29569

Remove unneeded typename keywords, breaks gcc 2.96 compilation

8 lines of code changed in 1 file:

callahan 2005-03-30 14:58 Rev.: 29567

Don't use <limits>, not defined everywhere (fixes gcc 2.96 compile)

2 lines of code changed in 1 file:

harman 2005-03-30 14:52 Rev.: 29566

added global variable d_dbgSym_cutoff_value

1 lines of code changed in 1 file:

harman 2005-03-30 14:51 Rev.: 29565

-added global variable dbg_Sym_cutoff_value, it's the definition of
"numerical fuzz"

<dbg_Sym_cutoff_value> 1e-10 </dbg_Sym_cutoff_value>

symmetryTest_(double & Vector)
- added conditional statement. Ignore doing symmetry test on
values < numerical fuzz.

29 lines of code changed in 1 file:

mdavis 2005-03-30 14:22 Rev.: 29564

Bugfix for #2122. Fix enable/disable connections with Subnets. Added connectionDisable connectionEnable methods. Fixed disabledTrace. Removed disableConneciton

73 lines of code changed in 3 files:

callahan 2005-03-30 12:54 Rev.: 29562

Use ios:: instead of ios_base::, fixes gcc 2.96 compilation

2 lines of code changed in 1 file:

callahan 2005-03-30 12:41 Rev.: 29560

Remove gratuitous typename, fix gcc 2.96 compilation

6 lines of code changed in 1 file:

allen 2005-03-30 12:28 Rev.: 29559

merged error message from branch

20 lines of code changed in 1 file:

allen 2005-03-30 12:25 Rev.: 29558

update for teem

26 lines of code changed in 2 files:

callahan 2005-03-30 11:53 Rev.: 29557

Synchronize Viewer with Scheduler execution completion tracking, move regression callback to use new functionality

240 lines of code changed in 16 files:

darbyb 2005-03-30 10:46 Rev.: 29555

Allow file names to have spaces. Instead of tcl strings being separated by spaces, each filename is now wrapped with curly braces. Old saved .net files are fixed to format filename appropriately. (sync with branch)

173 lines of code changed in 2 files:

mdavis 2005-03-29 17:32 Rev.: 29553

Add Shift-Middle-Mouse-Drag on Connection to split a connection segment down the middle. Add a few comments to the code. Only drag the connection segment the user clicked on.

71 lines of code changed in 1 file:

mdavis 2005-03-29 17:11 Rev.: 29552

Persistently save geometry of main SCIRun window ~/.scirun.geom

15 lines of code changed in 1 file:

oscar 2005-03-29 11:17 Rev.: 29548

includes run parameter now

2 lines of code changed in 1 file:

oscar 2005-03-29 11:16 Rev.: 29547

updated for iterSCIRUN.?

3 lines of code changed in 1 file:

oscar 2005-03-29 11:15 Rev.: 29546

Includes updates for the IterateSCIRun actor. Still need to change parameter for iterating runnable

115 lines of code changed in 2 files:

oscar 2005-03-29 11:12 Rev.: 29545

first attempt at the C++ code corresponding to IterateSCIRun actor in ptolemy. It is able to do some simple things but need cleaned up and made more general

127 lines of code changed in 2 files:

jas 2005-03-28 21:56 Rev.: 29544

Fix memory leak.

1 lines of code changed in 1 file:

mdavis 2005-03-28 19:35 Rev.: 29543

Bug 2572: Add ability to change routing of connections. Added procs: getPathLength, getPathSegment, setPathSegmentX setPathSegmentY, projectPointLine, pointLineDist, changeConnectionRoute, and routeChanged

112 lines of code changed in 1 file:

mdavis 2005-03-28 19:34 Rev.: 29542

Bug #2572 Save connection routing to .net file

7 lines of code changed in 1 file:

bard 2005-03-28 16:18 Rev.: 29541

Compute gvolumeglobal.

1 lines of code changed in 1 file:

bigler 2005-03-28 15:36 Rev.: 29540

Update the camera from the stealth inside the checkGuiFlags function.

6 lines of code changed in 1 file:

bigler 2005-03-28 15:34 Rev.: 29539

Added Keypad stealth camera movement.

58 lines of code changed in 1 file:

mjc 2005-03-28 15:21 Rev.: 29538

fix wierd averaging in compute_normals

3 lines of code changed in 1 file:

worthen 2005-03-28 15:08 Rev.: 29537

disable for now the testConvert1MAdd test

1 lines of code changed in 1 file:

darbyb 2005-03-28 13:58 Rev.: 29535

Sync with branch.

14 lines of code changed in 1 file:

jas 2005-03-28 12:44 Rev.: 29532

Don't use pTempPrevious for implicit calculations.

11 lines of code changed in 1 file:

jeroen 2005-03-28 11:57 Rev.: 29531

Added plugins for fields and matrices in matlab files. The ones for nrrds are still commented out. Startup contains the new init function which will force the mac to load the plugins

329 lines of code changed in 3 files:

bard 2005-03-28 11:07 Rev.: 29530

Modified various diagnostic calculations.

The grid stress interpolated from the particle is now volume weighted
The various boundary measurements (traction, force, area and cellarea)
have been corrected and/or modified.

47 lines of code changed in 1 file:

callahan 2005-03-25 18:58 Rev.: 29529

Destructive StreamLinesCleanupPoints, saves memory

11 lines of code changed in 2 files:

callahan 2005-03-25 18:39 Rev.: 29528

Minor streamlines optimizations

8 lines of code changed in 1 file:

mdavis 2005-03-25 17:40 Rev.: 29527

Fix Build for OSX

1 lines of code changed in 1 file:

jas 2005-03-25 16:31 Rev.: 29526

Implemented heat conduction for Implicit MPM.
Still need to add in boundary conditions.

141 lines of code changed in 6 files:

mdavis 2005-03-25 16:04 Rev.: 29525

Add Insight to DYLD_LIBRARY_PATH

8 lines of code changed in 5 files:

callahan 2005-03-25 14:58 Rev.: 29524

Minor cleanups

12 lines of code changed in 1 file:

worthen 2005-03-25 13:36 Rev.: 29522

test commit

0 lines of code changed in 2 files:

callahan 2005-03-25 12:47 Rev.: 29521

Simpler Scheduler::report_execution_finished, count Viewers

30 lines of code changed in 5 files:

yguo 2005-03-25 12:20 Rev.: 29520

Add in three MPM labels:
1. pTempCurrentLabel: particles' temperature at current time step, which is computed by interpolating grid temperature.
2. pTempPreviousLabel & pTempPreviousLabel_preReloc: particles' temperature at previous time step, which is computed by interpolating grid temperature.

18 lines of code changed in 2 files:

yguo 2005-03-25 12:16 Rev.: 29519

Add in the calculation of thermal stress.

26 lines of code changed in 1 file:

yguo 2005-03-25 12:15 Rev.: 29518

Add in a variable: alpha - thermal expansion coefficient.

1 lines of code changed in 1 file:

mdavis 2005-03-25 12:15 Rev.: 29517

Example use of BioPSEInit.

8 lines of code changed in 1 file:

yguo 2005-03-25 12:13 Rev.: 29516

Initialize pTempPrevious (particles' temperature at previous time step, which is computed by interpolating grid temperature) to be d_ref_temp.

26 lines of code changed in 2 files:

mdavis 2005-03-25 12:12 Rev.: 29515

Dont save total_frames gui var

1 lines of code changed in 1 file:

mdavis 2005-03-25 12:12 Rev.: 29514

Make findLib(string) a static public function. Called from SCIRunInit in main/init.cc

2 lines of code changed in 1 file:

callahan 2005-03-25 12:11 Rev.: 29513

Better Scheduler::report_execution_finished functionality, fix synchronization, multiple executes, use need_execute

143 lines of code changed in 3 files:

mdavis 2005-03-25 12:10 Rev.: 29512

Add init.cc to build

1 lines of code changed in 1 file:

mdavis 2005-03-25 12:10 Rev.: 29511

Move calls of macImportExportFoceLoad and macForceLoad to SCIRunInit() in init.cc

6 lines of code changed in 1 file:

yguo 2005-03-25 12:09 Rev.: 29510

Add in a parameter "d_ref_temp" for the calculation of thermal stresses. The ther
mal stress of the system is zero at the temperature of d_ref_temp.

3 lines of code changed in 1 file:

yguo 2005-03-25 12:08 Rev.: 29509

Add in a parameter "d_ref_temp" for the calculation of thermal stresses. The thermal stress of the system is zero at the temperature of d_ref_temp.

1 lines of code changed in 1 file:

mdavis 2005-03-25 12:07 Rev.: 29508

Initial commit of SCIRunInit function, called from main(). On Apple systems, it calls macForceLoad() and macImportExportForceLoad().

0 lines of code changed in 2 files:

uid3619 2005-03-25 12:06 Rev.: 29507

Add in the calculation of thermal stresses.

100 lines of code changed in 2 files:

callahan 2005-03-25 10:52 Rev.: 29506

Simple checking for end of execution in the Scheduler class (prototype)

122 lines of code changed in 3 files:

mdavis 2005-03-25 10:18 Rev.: 29504

Bug #2514: Correctly delete notes when destroying a module

3 lines of code changed in 1 file:

mdavis 2005-03-25 10:17 Rev.: 29503

Cleanup ClearCanvas method. Fit in 80 columns

14 lines of code changed in 1 file:

callahan 2005-03-25 02:24 Rev.: 29502

Fix comment

1 lines of code changed in 1 file:

callahan 2005-03-25 02:23 Rev.: 29501

Use Matrix::getRowNonzerosNoCopy

93 lines of code changed in 6 files:

callahan 2005-03-25 02:11 Rev.: 29500

Add an efficient copyless getRowNonzeros function

58 lines of code changed in 7 files:

callahan 2005-03-25 02:02 Rev.: 29499

Replace Array1 with vector

43 lines of code changed in 1 file:

bigler 2005-03-24 22:38 Rev.: 29498

Thread:: not Threads::

1 lines of code changed in 1 file:

bigler 2005-03-24 22:34 Rev.: 29497

Remove reference to RTRT::np. Updated for new Dpy constructure API.

3 lines of code changed in 3 files:

bigler 2005-03-24 22:33 Rev.: 29496

Remove reference to RTRT::np

0 lines of code changed in 2 files:

bigler 2005-03-24 22:19 Rev.: 29495

Remove references to np. Not needed anymore. Call return after the renderFrameless function is called.

2 lines of code changed in 1 file:

bigler 2005-03-24 22:16 Rev.: 29494

Use RTRT::nworkers instead of Dpy::nworkers. Remove Dpy::nworkers. Can now change the number of processors.

29 lines of code changed in 2 files:

bigler 2005-03-24 22:15 Rev.: 29493

Use RTRT::rtrt_nworkers instead of RTRT::np. Can now change the number of processors.

17 lines of code changed in 1 file:

bigler 2005-03-24 22:15 Rev.: 29492

Removed np from RTRT class.

0 lines of code changed in 2 files:

livne 2005-03-24 17:30 Rev.: 29491

Oren updates to the MATLAB ICE script: using correct mass instead of rho variable names in advectRho and advectQ; updated small-number treatment; firstorder/secondorder advection switch; separated plots and uintah results loading into separate scripts; added various debugging prinouts; nicified code. Compares vs. Uintah in second order mode, relative errors are about 1e-9.

630 lines of code changed in 14 files:

kuzimmer 2005-03-24 13:26 Rev.: 29488

If 'auto size' is checked in the interface, set the plane height and width if the Field uses a LatVolMesh.

44 lines of code changed in 1 file:

kuzimmer 2005-03-24 13:24 Rev.: 29487

Added 'auto size' and 'manual size' buttons to the interface.

8 lines of code changed in 1 file:

ayla 2005-03-24 11:21 Rev.: 29483


Updates to Hello World tests.

253 lines of code changed in 4 files:

ayla 2005-03-24 11:19 Rev.: 29482

Implement port descriptions.

40 lines of code changed in 3 files:

ayla 2005-03-24 11:18 Rev.: 29481

Implemented more types in TypeMap.

42 lines of code changed in 2 files:

ayla 2005-03-24 11:17 Rev.: 29480


Check for name conflict with a Uses port in addProvidesPort. Added documentation.

112 lines of code changed in 2 files:

bigler 2005-03-23 17:05 Rev.: 29479

Made the code framgments into two functions, fill_frameless_work and renderFrameless.

493 lines of code changed in 1 file:

bigler 2005-03-23 17:05 Rev.: 29478

Moved some variables that were only used in the framed rendering inside the rendermode branch. Added fill_frameless_work and renderFrameless functions to make WorkerFrameless only contain functions instead of code fragments.

20 lines of code changed in 1 file:

bigler 2005-03-23 17:04 Rev.: 29477

Make rank function inline and const. Added fill_frameless_work and renderFrameless functions to make WorkerFrameless only contain functions instead of code fragments.

7 lines of code changed in 1 file:

mdavis 2005-03-23 17:02 Rev.: 29476

Add Core/Containers to link to fix OSX build

0 lines of code changed in 2 files:

bigler 2005-03-23 17:02 Rev.: 29475

Fix frameless FPS reporting. Can now add and remove threads gracefully in frameless mode. There isn't reloading of work once the number of threads change, though.

58 lines of code changed in 1 file:

abrydon 2005-03-23 16:20 Rev.: 29474

one more broadcast to get times consistent across all procs

5 lines of code changed in 1 file:

callahan 2005-03-23 15:59 Rev.: 29473

QuadToTri regression test, do a latvolfield boundary

162 lines of code changed in 1 file:

callahan 2005-03-23 15:56 Rev.: 29472

Fix quad alternating cut algorithm. It was incorrectly dependend upon a particular node order. Instead we just mark the nodes by hand so that the diagonals match

68 lines of code changed in 1 file:

mjc 2005-03-23 14:49 Rev.: 29469

branch merge from VS package only, fixes for multi file readers/writers

3067 lines of code changed in 35 files:

mdavis 2005-03-23 12:23 Rev.: 29467

Change creation location of OSX apps

27 lines of code changed in 1 file:

mdavis 2005-03-23 12:22 Rev.: 29466

Updated scripts to run apps on os x

48 lines of code changed in 4 files:

mdavis 2005-03-23 11:17 Rev.: 29465

Use ends_with instead of strstr to determine if network is a PowerApp. Dont search executable name for .app (fixes OSX apps). Format for 80 columns.

12 lines of code changed in 1 file:

mdavis 2005-03-23 11:16 Rev.: 29464

Use ends_with instead of strstr to determine if network is a PowerApp

4 lines of code changed in 1 file:

mdavis 2005-03-23 11:16 Rev.: 29463

bool ends_with(string, string); added

0 lines of code changed in 4 files:

bigler 2005-03-22 16:11 Rev.: 29462

Added rtrtmodules make target.

15 lines of code changed in 6 files:

bigler 2005-03-22 16:08 Rev.: 29461

Updated to use the static version of traceRay.

0 lines of code changed in 2 files:

bigler 2005-03-22 16:07 Rev.: 29460

Updates for removal of Worker* from Context.

0 lines of code changed in 4 files:

bigler 2005-03-22 16:06 Rev.: 29459

Try and quiet the warning about variables could be uninitialized by make the last case default.

0 lines of code changed in 2 files:

bigler 2005-03-22 16:06 Rev.: 29458

Comment out print_string function. It's not needed.

0 lines of code changed in 2 files:

bigler 2005-03-22 16:04 Rev.: 29457

Change order of initialization to quiet GCC warnings. There can now be one extra context in ctx_pool to accommodate debug rays shot from a non worker thread. The rank now comes directly from the Context instead of the worker. Try to exit the proceedure early if things are bad. This makes the code not so indented.

0 lines of code changed in 2 files:

mdavis 2005-03-22 16:01 Rev.: 29456

Copy Module ID to X11 selection buffer for first module menu entry

8 lines of code changed in 1 file:

bigler 2005-03-22 16:01 Rev.: 29455

Change order of initialization to quiet GCC warnings.

0 lines of code changed in 2 files:

bigler 2005-03-22 16:00 Rev.: 29454

Updated to use the static version of traceRay.

22 lines of code changed in 26 files:

bigler 2005-03-22 15:55 Rev.: 29453

Moved include of PerProcessorContext.h from header file and included where needed.

0 lines of code changed in 10 files:

bigler 2005-03-22 15:52 Rev.: 29452

Try to quiet some warnings.

0 lines of code changed in 2 files:

bigler 2005-03-22 15:51 Rev.: 29451

Removed the Worker* member and replaced it with rendering_scene and worker_num.

0 lines of code changed in 4 files:

bigler 2005-03-22 15:50 Rev.: 29450

Added debug_ member variable and associated functions to turn bits on or off. Indented to 2 space tabs.

0 lines of code changed in 4 files:

bigler 2005-03-22 15:42 Rev.: 29449

Initialize variables to quiet warnings.

0 lines of code changed in 4 files:

bigler 2005-03-22 15:40 Rev.: 29448

traceRay functions are now static. There is also a new version of traceRay that has switches for debug rays. It is currently only turned on if the DEBUG macro is defined.

59 lines of code changed in 3 files:

bigler 2005-03-22 15:37 Rev.: 29447

Added last_changed and accum_count for frameless rendering.

0 lines of code changed in 2 files:

bigler 2005-03-22 15:37 Rev.: 29446

Added frameless rendering back in. You can't resize the window or turn the frameless rendering on or off yet. Don't let the number of workers exceed the number of processors on the system.

270 lines of code changed in 1 file:

bigler 2005-03-22 15:33 Rev.: 29445

Added j for jitter toggle. Added ability to trace a debug ray at runtime.

27 lines of code changed in 1 file:

bigler 2005-03-22 15:32 Rev.: 29444

Remove CVS log message commented out.

0 lines of code changed in 2 files:

bigler 2005-03-22 15:32 Rev.: 29443

Initialize variables to squash warnings. Changed my_alloc to ply_alloc.

0 lines of code changed in 4 files:

bigler 2005-03-22 15:29 Rev.: 29442

Fix includes for Uintah rearrangement.

4 lines of code changed in 2 files:

bigler 2005-03-22 15:28 Rev.: 29441

Use typedef to make the code a bit more legible. Name the light, so we can interact with it from the GUI.

0 lines of code changed in 2 files:

bigler 2005-03-22 15:27 Rev.: 29440

Initialize nextC to 0 to squash warnings.

0 lines of code changed in 2 files:

mdavis 2005-03-22 13:18 Rev.: 29437

Move External Applicaiton Interface initialization to void start_eai() method. Re-format to fit in 80 columns. Save servicemanager log files in ~/SCIRun

91 lines of code changed in 1 file:

bigler 2005-03-22 12:04 Rev.: 29435

Cleanup allocated memory in complete_command.

1 lines of code changed in 1 file:

darbyb 2005-03-22 11:14 Rev.: 29421

Fix setting label.

1 lines of code changed in 1 file:

harman 2005-03-21 19:05 Rev.: 29419

linearInterpolation()
- draw a vector between the coarse cell center and the mid point of the patch.
- use this vector to determine the surrounding interpolation cells

refine_CF_interfaceOperator() & CoarseToFineOperator()
- calculate the midpoint of the patch

refineCoarseFineBoundaries()
- changes to cout_dbg

fineToCoarseOperator()
- use Ghost::AroundCells, 1 for fine_q_CC

46 lines of code changed in 1 file:

harman 2005-03-21 18:43 Rev.: 29418

Don't convert the user specified starting and ending cell indicies to
the corresponding coarse level indices when the number of levels is > 0

11 lines of code changed in 1 file:

mdavis 2005-03-21 18:38 Rev.: 29417

Revert back to hard coded values as rpmbuild is too brain-dead to handle environment variables consistently.

9 lines of code changed in 1 file:

harman 2005-03-21 18:36 Rev.: 29416

computeVel_FC() & addExchangeContributionToFCVel()
- removed adjustment to (*)_FC iterators when there is more than 1 level

0 lines of code changed in 1 file:

callahan 2005-03-21 18:36 Rev.: 29415

TensorsToIndices now collapses duplicate entries to the same index

61 lines of code changed in 2 files:

abrydon 2005-03-21 15:10 Rev.: 29413


When using MPI, set d_checkpointWalltimeInterval based on the clock of
processor zero. This fixes a consistency problem when the clocks of remote
machines are not in sync.

13 lines of code changed in 1 file:

mdavis 2005-03-21 11:29 Rev.: 29411

define SCIRUN_VERSION and SCIRUN_THIRDPARTY_VERSION outside spec file for external script control of build

15 lines of code changed in 1 file:

mdavis 2005-03-21 11:24 Rev.: 29410

Format for 80 columns

5 lines of code changed in 1 file:

dav 2005-03-20 19:30 Rev.: 29407

Put back in path_to_src creation.

7 lines of code changed in 2 files:

skumar 2005-03-20 02:17 Rev.: 29406

stuff for sulfur chemistry

283 lines of code changed in 16 files:

dav 2005-03-19 17:10 Rev.: 29405

Fixed check to see if configure is running in src dir.

5 lines of code changed in 2 files:

worthen 2005-03-18 23:06 Rev.: 29404

Remove redundant swapbytes(bool) for AIX. Defined in ReductionVariable.h

0 lines of code changed in 1 file:

dmw 2005-03-18 18:37 Rev.: 29403

- Add MacForceLoad to TriSurfToVtk; fix usage info for TextToPointCloudString

21 lines of code changed in 2 files:

dmw 2005-03-18 18:09 Rev.: 29402

- Keep source files listed alphabetically

3 lines of code changed in 1 file:

dav 2005-03-18 17:53 Rev.: 29400

Catch another case of trying to configure in src directory!

2 lines of code changed in 2 files:

aek 2005-03-18 17:05 Rev.: 29399

Added glut and glui libraries to link line of auxilary programs. (Bigler)

0 lines of code changed in 2 files:

mdavis 2005-03-18 15:40 Rev.: 29398

Dont print out message when not finding optional makers

2 lines of code changed in 1 file:

mdavis 2005-03-18 15:19 Rev.: 29397

Update SCIRUN_RCFILE_VERSION

1 lines of code changed in 1 file:

worthen 2005-03-18 13:32 Rev.: 29396

Fix compile

2 lines of code changed in 1 file:

mdavis 2005-03-18 13:04 Rev.: 29394

Update RPMs for 1.25.0 build

18 lines of code changed in 4 files:

mdavis 2005-03-18 12:52 Rev.: 29393

Changes to build 1.25.0 rpms

4 lines of code changed in 1 file:

mdavis 2005-03-18 10:47 Rev.: 29392

Increase version number

0 lines of code changed in 2 files:

mdavis 2005-03-18 10:04 Rev.: 29391

Remove debug puts

19 lines of code changed in 1 file:

worthen 2005-03-17 21:36 Rev.: 29390

define SELECT_RANGETRE in Level.cc instead of Level.h

12 lines of code changed in 2 files:

worthen 2005-03-17 21:35 Rev.: 29389

use new refine

7 lines of code changed in 4 files:

worthen 2005-03-17 21:34 Rev.: 29388

use new refine, don't call refine faces on coarsen

37 lines of code changed in 3 files:

worthen 2005-03-17 21:34 Rev.: 29387

more complex regridder test

0 lines of code changed in 4 files:

worthen 2005-03-17 21:34 Rev.: 29386

AMRWave works (without interpolation)

95 lines of code changed in 3 files:

worthen 2005-03-17 21:32 Rev.: 29385

new version of refine for everybody - take a patchset instead of a level

2 lines of code changed in 2 files:

worthen 2005-03-17 21:31 Rev.: 29384

sync with Scheduler2

579 lines of code changed in 3 files:

worthen 2005-03-17 21:29 Rev.: 29383

Use a debugstream to output new grids

2 lines of code changed in 1 file:

worthen 2005-03-17 21:29 Rev.: 29382

New version of scheduleDataCopy

87 lines of code changed in 2 files:

worthen 2005-03-17 21:16 Rev.: 29381

fix warnings and fix rounding level lowpoint problem

3 lines of code changed in 1 file:

kuzimmer 2005-03-17 16:00 Rev.: 29379

move template files into one so that all variables will be instantiated on OS X

73 lines of code changed in 8 files:

dav 2005-03-17 13:15 Rev.: 29378

Fix merge from branch. the find_and_parse_scirunrc() function was moved to Core/TCLThread/TCLThread.cc. When we merged from the branch, it got stuck back in main. I have removed it again.

0 lines of code changed in 1 file:

dav 2005-03-17 12:42 Rev.: 29377

Cleaned up formatting a bit.

39 lines of code changed in 1 file:

dmw 2005-03-16 21:11 Rev.: 29372

- Need to explicitly link Insight libs for Mac (syncs with branch)

1 lines of code changed in 1 file:

dmw 2005-03-16 10:40 Rev.: 29360

- Copy change from branch to trunk

6 lines of code changed in 2 files:

bigler 2005-03-15 20:11 Rev.: 29357

Removed the mutex argument to PatchToField constructor.

0 lines of code changed in 2 files:

callahan 2005-03-15 19:10 Rev.: 29356

Merge v1_24_1_release into trunk

31 lines of code changed in 1 file:

callahan 2005-03-15 18:20 Rev.: 29355

Merge v1_24_1_release into trunk

1060 lines of code changed in 14 files:

callahan 2005-03-15 18:13 Rev.: 29354

Merge v1_24_1_release into trunk

1 lines of code changed in 1 file:

bigler 2005-03-15 18:09 Rev.: 29353

Get rid of old code. Add comments to functions. Clean some other various things.

142 lines of code changed in 2 files:

bigler 2005-03-15 18:08 Rev.: 29352

Remove debugging code.

0 lines of code changed in 1 file:

callahan 2005-03-15 18:00 Rev.: 29351

Merge v1_24_1_release into trunk

1 lines of code changed in 1 file:

callahan 2005-03-15 17:10 Rev.: 29350

Merge v1_24_1_release into trunk

69 lines of code changed in 1 file:

callahan 2005-03-15 17:02 Rev.: 29349

Merge v1_24_1_release into trunk

6508 lines of code changed in 97 files:

bigler 2005-03-15 17:02 Rev.: 29348

OK, big changes. I moved a lot of templated code from the header file to the cc file since this code wasn't used anywhere else. I also added some functions that make clever use of templates to reduce the amount of replicated code. The code will hopefully be easier to read. There is a macro that turns on the use of this new code and is on. If you experience trouble, you can easily go back to the original code. The old code will be removed soon.

639 lines of code changed in 2 files:

bigler 2005-03-15 16:58 Rev.: 29347

Don't take a mutex since it's not used. This was possibly used to update the progress bar, but that functionality has been removed for some time now. The semaphore parameter also defaults to null and is not used in this case. This allows the code to be run outside of a thread without the need for a semaphore and mutex.

8 lines of code changed in 1 file:

worthen 2005-03-15 16:43 Rev.: 29346

Get windows to recognize the datatypes

3 lines of code changed in 1 file:

callahan 2005-03-15 16:41 Rev.: 29345

Merge v1_24_1_release into trunk

1048 lines of code changed in 52 files:

callahan 2005-03-15 16:23 Rev.: 29344

Merge v1_24_1_release into trunk

2336 lines of code changed in 41 files:

harman 2005-03-15 14:54 Rev.: 29342

gcc3.4 ...barf.

5 lines of code changed in 1 file:

harman 2005-03-15 14:47 Rev.: 29341

gcc3.4 fixes

4 lines of code changed in 1 file:

jas 2005-03-15 14:30 Rev.: 29339

Allow resolveIncludes to work when input file does not end in .ups.

4 lines of code changed in 1 file:

bigler 2005-03-15 14:23 Rev.: 29338

node_debug is a member of NodeHedgehog not NodeHedgehogWorker. Made checking for input from the ports check the pointer too.

8 lines of code changed in 1 file:

harman 2005-03-15 14:13 Rev.: 29337

- added interpolationTest()

Linear& Quadratic Interpolation()
- cleaned out testing code and shoved it in interpolationTest()

interpolationInterface()
- added test data initialization, still not being used.

refine_CF_interfaceOperator()
- cleaned out testing code and shoved it in interpolationInterface()
- LinearInterpolator currently being used.

CoarseToFineOperator()
- now using linearInterpolator().

154 lines of code changed in 1 file:

harman 2005-03-15 09:01 Rev.: 29331

turned off interplationWrapper, it needs to stay in the oven a little longer.

2 lines of code changed in 1 file:

worthen 2005-03-14 11:57 Rev.: 29309

Windows temp fix

2 lines of code changed in 1 file:

anup 2005-03-11 17:33 Rev.: 29280

Missing brackets in addComputesRequires added.

3 lines of code changed in 1 file:

banerjee 2005-03-11 15:48 Rev.: 29278

Changed process fro computing dStar. Corrected error in semi-implicit
part of the stress update (now using ||s_{n+1}|| = sqrt(2/3) sig_y)
in place of previous ||s_{n+1}|| = sqrt(2) sig_y ).

204 lines of code changed in 1 file:

jas 2005-03-11 12:43 Rev.: 29275

Put ifdef HAVE_PETSC around some variables.

3 lines of code changed in 1 file:

harman 2005-03-11 10:46 Rev.: 29274

compiler warnings

3 lines of code changed in 1 file:

worthen 2005-03-10 20:40 Rev.: 29268

Add the refinement ratio as a parameter to the Level constructor

39 lines of code changed in 2 files:

worthen 2005-03-10 20:40 Rev.: 29267

Automatically determine the refinement ratio by comparing with the precious level in the same grid

15 lines of code changed in 1 file:

worthen 2005-03-10 20:39 Rev.: 29266

Remove explicit setting of refinement ratio

0 lines of code changed in 1 file:

harman 2005-03-10 18:22 Rev.: 29262

Globally:
more descriptive variable names (before James goes "medieval" on me;)

fineToCoarseOperator()
only push the interior cell data down to the coarse grid, ignore
the extra cells of the fine level.

deleted: linearInterpolationWeights

Added: linearInterpolation() & quadraticInterpolation()
- should work with any refinement ratio --still testing.
- still has lots of testing code.

refine_CF_interfaceOperator()
- replaced existing interpolators
- still has lots of testing code.

more testing of interpolators needed.

317 lines of code changed in 1 file:

worthen 2005-03-10 17:32 Rev.: 29259

add a comment for refine

1 lines of code changed in 1 file:

worthen 2005-03-10 17:29 Rev.: 29258

new DataCopy

3 lines of code changed in 1 file:

worthen 2005-03-10 17:28 Rev.: 29257

Try to keep up with changes to Schedulers

108 lines of code changed in 6 files:

worthen 2005-03-10 17:28 Rev.: 29256

Better debug streams to better help failing mpi communication

53 lines of code changed in 7 files:

worthen 2005-03-10 17:27 Rev.: 29255

Automatically detect which variables from which materials and levels need to be copied and do it

113 lines of code changed in 2 files:

worthen 2005-03-10 17:24 Rev.: 29254

use new method of copy data

4 lines of code changed in 1 file:

worthen 2005-03-10 17:24 Rev.: 29253

don't compile SimpleSimulationController

1 lines of code changed in 1 file:

worthen 2005-03-10 17:24 Rev.: 29252

get rid of debug printout

0 lines of code changed in 1 file:

bigler 2005-03-10 17:04 Rev.: 29251

Don't use 'using namespace SCIRun' inside the Uintah namespace, as well as other namespace things.

132 lines of code changed in 15 files:

bigler 2005-03-10 16:57 Rev.: 29250

Comment out some unused parameter.

1 lines of code changed in 1 file:

bigler 2005-03-10 16:56 Rev.: 29249

Don't use 'using namespace SCIRun' inside the Uintah namespace, as well as other namespace things.

70 lines of code changed in 22 files:

bigler 2005-03-10 16:55 Rev.: 29248

Fixed ASSERTRANGE so that it doesn't produce warnings and does the right thing.

14 lines of code changed in 2 files:

bigler 2005-03-10 16:51 Rev.: 29247

Don't use 'using namespace SCIRun' inside the Uintah namespace.

5 lines of code changed in 1 file:

kuzimmer 2005-03-10 15:38 Rev.: 29242

Temporary update to TextureBuilder so that min and max data values at all levels of a Multi-level field were accounted for, need a better solution

44 lines of code changed in 1 file:

worthen 2005-03-10 15:25 Rev.: 29241

get rid of multiply defined symbols so mac will run

17 lines of code changed in 6 files:

worthen 2005-03-10 15:24 Rev.: 29240

get turing (mac cluster) to run MPI

8 lines of code changed in 1 file:

banerjee 2005-03-10 12:54 Rev.: 29234

Removed bug in polar decomposition. Negative values were being set
to zero.

29 lines of code changed in 1 file:

jas 2005-03-09 17:08 Rev.: 29226

Fix the initialization of NGN and NGP.

1 lines of code changed in 1 file:

bigler 2005-03-09 15:40 Rev.: 29220

Added missing break statements.

8 lines of code changed in 1 file:

bigler 2005-03-09 13:42 Rev.: 29216

Untabify. PatchToFieldThread consistencies.

162 lines of code changed in 2 files:

kuzimmer 2005-03-09 12:13 Rev.: 29214

Changed new2OldPatchMap initialization, use find() instead of [] to retrieve patch lists from the map, added some error checking and changed some variable names so James doesn't get medieval on me. :-), fixes a portion of bug 2532

108 lines of code changed in 2 files:

mjc 2005-03-08 23:26 Rev.: 29211

very basic modeling support for tri surf

222 lines of code changed in 5 files:

jas 2005-03-08 16:59 Rev.: 29209

Append .rt to the input file name when running sus. Remove this temporary file.

2 lines of code changed in 1 file:

jas 2005-03-08 16:32 Rev.: 29205

Copy input files to the same location as the sus executable.

3 lines of code changed in 1 file:

bigler 2005-03-08 13:51 Rev.: 29203

If the colormap min and max are too close the colormap looks like a single color. The code now checks for this and rescales a copy of the colormap to make it display properly.

18 lines of code changed in 1 file:

guilkey 2005-03-08 11:00 Rev.: 29200

Changed "format" to "type" in the comment section describing the usage.

1 lines of code changed in 1 file:

jas 2005-03-08 10:46 Rev.: 29199

Compilation instructions.

7 lines of code changed in 1 file:

jas 2005-03-08 10:46 Rev.: 29198

Heat conduction code that was in SerialMPM.

459 lines of code changed in 2 files:

jas 2005-03-08 10:45 Rev.: 29197

Factored out heat conduction code into its own class.

20 lines of code changed in 5 files:

worthen 2005-03-07 14:22 Rev.: 29185

test to make sure sendCVSmail works

1 lines of code changed in 1 file:

worthen 2005-03-05 18:07 Rev.: 29171

get code using scinew and DISABLE_SCI_MALLOC to compile

2 lines of code changed in 1 file:

jas 2005-03-04 21:27 Rev.: 29166

Add testConvert1MAdd.ups

2 lines of code changed in 1 file:

worthen 2005-03-04 19:26 Rev.: 29163

Test addition to cvs mail

1 lines of code changed in 1 file:

asade 2005-03-04 17:37 Rev.: 29149

*** empty log message ***

219 lines of code changed in 1 file:

bigler 2005-03-04 15:44 Rev.: 29140

Added ability to keep track of the line number where the memory was allocated. While the API exposes it, it is currently turned off by a macro in AllocPriv.h. If it is turned on then you get the functionality. Since the macro is defined in AllocPriv.h and this file is only included by .cc files in this library you don't have to recompile the world if you want to turn it on. Uncomment the macro and recompile the library.

116 lines of code changed in 6 files:

darbyb 2005-03-04 13:21 Rev.: 29125

Remove include Packages/Insight/share/share.h and reference to InsightSHARE in class declarations.

46 lines of code changed in 51 files:

darbyb 2005-03-04 13:15 Rev.: 29124

Fix checking of ITK version (sync with branch).

10 lines of code changed in 2 files:

worthen 2005-03-04 12:51 Rev.: 29122

get rid of cerrLock that is conflicting with the one in Uintah/Core/Util

0 lines of code changed in 8 files:

jas 2005-03-04 12:20 Rev.: 29121

Change signature.

8 lines of code changed in 3 files:

worthen 2005-03-03 13:25 Rev.: 29102

Get Windows dynamic compiler to generate a log

34 lines of code changed in 1 file:

worthen 2005-03-03 13:24 Rev.: 29101

remove print statements

0 lines of code changed in 2 files:

worthen 2005-03-03 13:24 Rev.: 29100

search for make on windows without the path

54 lines of code changed in 2 files:

darbyb 2005-03-03 13:20 Rev.: 29099

Add types double and float so that any properties set with the NrrdSetProperty module will read and write correctly (sync with branch).

2 lines of code changed in 1 file:

harman 2005-03-03 10:57 Rev.: 29096

refineCoarseFineInterface() & coarsen()
- only dump out cout_dbg on one of the variables not all 5

12 lines of code changed in 1 file:

mjc 2005-03-02 21:42 Rev.: 29095

more robust support

58 lines of code changed in 1 file:

dav 2005-03-02 18:10 Rev.: 29079

Sync with branch the -fPIC for 64 bit linux fortran

2 lines of code changed in 2 files:

worthen 2005-03-02 14:44 Rev.: 29065

Get mac to compile

5 lines of code changed in 5 files:

worthen 2005-03-02 14:43 Rev.: 29064

include sci_values

1 lines of code changed in 1 file:

worthen 2005-03-02 14:34 Rev.: 29063

Use Core/Grid/Variables instead of Core/Variables, and satisfy picky Mac linker

238 lines of code changed in 147 files:

worthen 2005-03-02 14:33 Rev.: 29062

Fix debug stream

22 lines of code changed in 4 files:

worthen 2005-03-02 14:30 Rev.: 29061

Use Core/Grid/Variables and BoundaryConditions

14282 lines of code changed in 136 files:

worthen 2005-03-02 14:29 Rev.: 29060

remove Core/BoundaryConditions

0 lines of code changed in 42 files:

worthen 2005-03-02 14:28 Rev.: 29059

remove core/variables

0 lines of code changed in 83 files:

worthen 2005-03-02 14:20 Rev.: 29058

Use Core/Grid/Variables instead of Core/Variables, and satisfy picky Mac linker

1015 lines of code changed in 330 files:

harman 2005-03-02 13:06 Rev.: 29056

First order advection shock tube problem now gives similar results to sus -ice

201 lines of code changed in 4 files:

worthen 2005-03-02 11:45 Rev.: 29052

if on a windows machine, be satisfied with objtop/on-the-fly-libs

6 lines of code changed in 1 file:

worthen 2005-03-02 11:45 Rev.: 29051

Only run specified update idletasks if NOT on a windows machine

15 lines of code changed in 1 file:

worthen 2005-03-02 09:52 Rev.: 29047

change a few toplevel virtual prototypes

18 lines of code changed in 1 file:

worthen 2005-03-01 22:16 Rev.: 29045

create scheduler3 components. Use at your own risk

34 lines of code changed in 2 files:

worthen 2005-03-01 22:15 Rev.: 29044

compile scheduler3

1 lines of code changed in 1 file:

worthen 2005-03-01 22:14 Rev.: 29043

remove dependency on scheduler component

7 lines of code changed in 2 files:

worthen 2005-03-01 22:11 Rev.: 29042

conform to new variable specs

50 lines of code changed in 5 files:

worthen 2005-03-01 22:10 Rev.: 29041

get things to compile with new variables

9 lines of code changed in 4 files:

worthen 2005-03-01 22:09 Rev.: 29040

Have 'assignResources' for DetailedTasks3

156 lines of code changed in 6 files:

worthen 2005-03-01 22:08 Rev.: 29039

Use types inherited from Variable

0 lines of code changed in 18 files:

worthen 2005-03-01 22:07 Rev.: 29038

Add GridVariable as an intermediate to Variable and CC,NC,SFCX,SFCY, and SFCZ Variable Bases.

0 lines of code changed in 23 files:

worthen 2005-03-01 22:04 Rev.: 29037

New Scheduler3 components

7780 lines of code changed in 15 files:

worthen 2005-03-01 16:38 Rev.: 29029

add function so you can toggle the state of a debugstream

1 lines of code changed in 1 file:

callahan 2005-03-01 14:30 Rev.: 29027

Fix bad copy/paste error in put() function, (from branch)

1 lines of code changed in 1 file:

bigler 2005-03-01 12:43 Rev.: 29023

Use FieldHandle instead of sending pointer down the pipe. Use breaks instead of returns.

118 lines of code changed in 1 file:

bigler 2005-03-01 12:41 Rev.: 29022

Use PSetHandle instead of PSet*.

16 lines of code changed in 2 files:

bigler 2005-03-01 12:38 Rev.: 29021

Use a ScalarParticlesHandle instead of the just the pointer. Don't use local includes.

16 lines of code changed in 1 file:

allen 2005-03-01 10:50 Rev.: 29018

removed the shared.h

15 lines of code changed in 3 files:

allen 2005-03-01 10:41 Rev.: 29016

removed the shared.h

4 lines of code changed in 6 files:

jas 2005-03-01 09:16 Rev.: 29013

Change abs to Abs for gcc-3.4.

4 lines of code changed in 1 file:

jeroen 2005-03-01 07:54 Rev.: 29012

updates on trunk

10 lines of code changed in 10 files:

February 2005 »

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