April 2005 Commit Log

Number of Commits:
333
Number of Active Developers:
29
callahan 2005-04-30 23:57 Rev.: 30043

Only flush to tcl if there's something to send

5 lines of code changed in 1 file:

callahan 2005-04-30 21:56 Rev.: 30042

Use ProgressReporter in DynamicLoader code for error reporting

152 lines of code changed in 4 files:

sparker 2005-04-30 21:50 Rev.: 30041

Added Exp function for doubles and floats

0 lines of code changed in 2 files:

callahan 2005-04-30 21:40 Rev.: 30040

Flush message stream more often

1 lines of code changed in 1 file:

callahan 2005-04-30 20:54 Rev.: 30039

Better reporter logging, append, pretty colors

48 lines of code changed in 3 files:

callahan 2005-04-29 21:38 Rev.: 30038

Fix compilation

0 lines of code changed in 1 file:

callahan 2005-04-29 21:31 Rev.: 30037

Split field writers to support HexVolMesh types, fix MatrixOPort name mismatch bug.

133 lines of code changed in 3 files:

slew 2005-04-29 20:29 Rev.: 30036

bug fixes in converter

128 lines of code changed in 1 file:

slew 2005-04-29 20:27 Rev.: 30035

new converter update

110 lines of code changed in 1 file:

callahan 2005-04-29 19:17 Rev.: 30034

Wrap glPixelStorei, fixes OpenGL error reports on unsupported hardware

10 lines of code changed in 1 file:

jas 2005-04-29 13:53 Rev.: 30033

Use template <> for specialization needed by gcc-4

0 lines of code changed in 2 files:

guilkey 2005-04-29 13:47 Rev.: 30032

These aren't used and are just a source of confusion.

0 lines of code changed in 2 files:

banerjee 2005-04-29 13:37 Rev.: 30031

Assigned default value to pPrevTemp to avoid problems if
d_ref_temp is not initialized to a nonzero value.

4 lines of code changed in 1 file:

jas 2005-04-29 11:45 Rev.: 30030

Revert single large Uintah_Core.so to smaller Uintah_Core_*.so.

351 lines of code changed in 79 files:

callahan 2005-04-29 10:02 Rev.: 30028

Cleanups in send_results_file

30 lines of code changed in 1 file:

jas 2005-04-29 09:53 Rev.: 30027

Remove invalid header file.

0 lines of code changed in 2 files:

jas 2005-04-29 09:47 Rev.: 30026

Remove the unused Util directory.

0 lines of code changed in 1 file:

worthen 2005-04-28 13:42 Rev.: 30018

Initialize boundary to 0,0,0 - should fix compare_uda

1 lines of code changed in 1 file:

worthen 2005-04-28 13:01 Rev.: 30017

Remove print statement

0 lines of code changed in 1 file:

callahan 2005-04-28 11:46 Rev.: 30016

minor, fix disabled/enabled state of memory picker in saved TextureBuilder modules

4 lines of code changed in 2 files:

callahan 2005-04-28 11:40 Rev.: 30015

Remove -1 optimization from sx/sy, doesn't work

4 lines of code changed in 1 file:

callahan 2005-04-28 11:40 Rev.: 30014

Change brick weight back

1 lines of code changed in 1 file:

callahan 2005-04-28 11:33 Rev.: 30012

Fix off by 4 error in nrrd_build_bricks max memory calculation

2 lines of code changed in 1 file:

callahan 2005-04-28 11:19 Rev.: 30011

Fix sx/sy for 3D texture nrrds

41 lines of code changed in 2 files:

bigler 2005-04-28 10:33 Rev.: 30010

rtrt/Core/DpyGui.cc

Bound synch_frameless toggle to "F".

rtrt/Core/Light.h

Added comment about light indicies.

rtrt/Core/Shadows/HardShadows.cc

Added comments about what was going on. The code is unmodified.

rtrt/Core/Scene.h

Added a comment about lightbits member variable. Removed unused
nonActiveLights_ and nonActivePerMatlLights_ member variables as they
were not used.

rtrt/Core/Scene.cc

lightbits is now computed using the total number of lights minus one
instead of just the total number of lights. Removed unused
nonActiveLights_ and nonActivePerMatlLights_ member variables as they
were not used.

rtrt/Core/WorkerFrameless.cc

Removed some dead comments. Added resizeColors to reduce some code duplication. lastC* are now initialized to Color(0,0,0). This fixed a problem where you saw random colors on the screen. All should be well now.

50 lines of code changed in 9 files:

callahan 2005-04-28 09:49 Rev.: 30009

Implement Copyless NrrdTextureBuilder. It now pushes the data directly from the input nrrds to the graphics card without building copy 'bricks' and padding them out. This requires the GL_ARB_texture_non_power_of_two OpenGL extension (only supported by GeForce 6800 at this time).

152 lines of code changed in 6 files:

callahan 2005-04-28 08:55 Rev.: 30008

Fix compilation

0 lines of code changed in 1 file:

harman 2005-04-28 08:24 Rev.: 30007

quadraticInterpolation()
-added asci_art

38 lines of code changed in 1 file:

mjc 2005-04-27 18:19 Rev.: 30005

fix crash bug, remove SciTclStream

58 lines of code changed in 12 files:

hartner 2005-04-27 17:06 Rev.: 30003

the code that determines the amount of RAM on the SGI Prism
can crash SCIRun. For now, just return 256MB, which is the amount
of memory on the firegl graphics cards used in the prism.

6 lines of code changed in 1 file:

hartner 2005-04-27 16:58 Rev.: 30002

sgi ia64 rendering freetype fonts gives a SIGBUS.

4 lines of code changed in 1 file:

hartner 2005-04-27 16:35 Rev.: 30001

don't use cblas on SGI altix (only blas)

48 lines of code changed in 2 files:

bigler 2005-04-27 16:33 Rev.: 30000

Made it work for frameless rendering.

0 lines of code changed in 2 files:

bigler 2005-04-27 16:32 Rev.: 29999

living-room2.cc

Fixed living room scene to use only a single accelaration structure.

david.cc

Better camera and light positions.

sub.mk

Added living-room2 scene.

96 lines of code changed in 5 files:

hartner 2005-04-27 16:22 Rev.: 29998

use SGI's Scientific Computing Software Library (SCSL) routines
for blas and lapack on the prism (sgi ia64).

for more info, see prism.sci.utah.edu:/usr/share/doc/sgi-scsl-1.5.1.1/README.relnotes
and the sgi-scsl rpm.

753 lines of code changed in 2 files:

livne 2005-04-27 16:19 Rev.: 29997

Added tex file of the report

0 lines of code changed in 5 files:

oscar 2005-04-27 15:53 Rev.: 29996

Removed unnecessary SO_FLAGS from makefile.

0 lines of code changed in 1 file:

harman 2005-04-27 15:23 Rev.: 29993

added a new custom initialization (McDermott's method of manufactured solutions)

72 lines of code changed in 5 files:

jeroen 2005-04-27 14:41 Rev.: 29992

reduced file buffer to within 16bit limit

0 lines of code changed in 2 files:

mdavis 2005-04-27 13:58 Rev.: 29990

Dont open module long when using scroll wheel over message indicator. Right-mouse button opens module menu over message indicator

3 lines of code changed in 1 file:

jas 2005-04-27 13:40 Rev.: 29989

Convert all libraries under the Uintah_Core_ to a single Uintah_Core.so.

92 lines of code changed in 52 files:

mjc 2005-04-27 09:23 Rev.: 29985

add HexVolToVtk to build

5 lines of code changed in 1 file:

jas 2005-04-27 08:52 Rev.: 29984

Remove reference to Matrix3 -- causes circular dependencies after move
of LinearInterpolator to Core/Math.

Turn off graphview compilation until it can be compiled cleanly.

7 lines of code changed in 7 files:

harman 2005-04-27 08:42 Rev.: 29983

comment out all delT requires, needed by AMR
added level to all get(delT....., level) calls

12 lines of code changed in 1 file:

worthen 2005-04-27 00:11 Rev.: 29981

Save/read the boundary layer so scirun and other utilities don't lie when there is a boundary layer

13 lines of code changed in 3 files:

jas 2005-04-26 20:58 Rev.: 29980

Change the header file location for ParticleInterpolator.h.

1 lines of code changed in 1 file:

jas 2005-04-26 20:38 Rev.: 29978

Delete Interpolator files from MPM/.

0 lines of code changed in 5 files:

jas 2005-04-26 20:35 Rev.: 29977

Move LinearInterpolator and Node27Interpolator to Uintah/Core/Math

0 lines of code changed in 5 files:

jas 2005-04-26 20:34 Rev.: 29976

Move LinearInterpolator and Node27Interpolator to Uintah/Core/Math.

15 lines of code changed in 12 files:

callahan 2005-04-26 20:05 Rev.: 29975

Flush geom port when texture is dirty

15 lines of code changed in 1 file:

callahan 2005-04-26 18:02 Rev.: 29973

Support 4D time dependent data (last axis is time)

77 lines of code changed in 1 file:

callahan 2005-04-26 18:02 Rev.: 29972

Fix crash bug when labels bad

5 lines of code changed in 1 file:

harman 2005-04-26 17:48 Rev.: 29971

INITIAL AMR REFLUX COMMIT
MPMICE.cc
__________________________________
scheduleAdvectAndAdvanceInTime()
- push AMR_subCycleVar into scheduleAdvectAndAdvanceInTime()

5 lines of code changed in 1 file:

harman 2005-04-26 17:47 Rev.: 29970

INITIAL AMR REFLUX COMMIT
ICE.cc
__________________________________
scheduleAdvectAndAdvanceInTime()
- added computes and requires for AMR face fluxes
mass, momentum, sp_vol, int_eng

advectAndAdvanceInTime()
- use the struct advectVarBasket to pass in common variables and
flags to each of the advectQ calls.

AMRICE.cc
__________________________________
scheduleCoarsen()
-added a call to scheduleReflux()

Added:
scheduleReflux(), reflux(), refluxOperator()
At the coarse fine interfaces keep track of the fluxes of mass, momentum,
energy, sp_vol, (eventually scalar-f) that move between the two levels.
The flux from the fine level is added to the coarse level.

Advector.cc
__________________________________
added utility function patchFaceToCellFace(patch face)
- returns the cell face that corresponds to the patch face.

Advector.h
__________________________________
-added struct advectVarBasket
-updated advectQ prototype calls
-renamed the functors


FirstOrderAdvector.cc FirstOrderCEAdvector.cc
SecondOrderAdvector.cc SecondOrderCEAdvector.cc
__________________________________
- nuked tabs
- updated all advectQ function calls, passing in advectVarBasket
- renamed compute_q_FC ->q_FC_operator
compute_q_FC_PlusFaces -> q_FC_PlusFaces
-added q_FC_flux_operator()
computes q_faceFlux
-added q_FC_fluxes
- allocates and puts desc + "_(X,Y,Z)_FC_flux"
- call q_FC_flux_operator for each patch face that's on a
coarseFineInterface.

FirstOrderAdvector.h FirstOrderCEAdvector.h
SecondOrderAdvector.h SecondOrderCEAdvector.h
__________________________________
-updated prototypes
- added q_FC_flux_operator and q_FC_fluxes
-nuked tabs

1387 lines of code changed in 17 files:

livne 2005-04-26 15:46 Rev.: 29967

Added formula for the numerical flux of conservative ICE

0 lines of code changed in 2 files:

hartner 2005-04-26 15:40 Rev.: 29966

Currently the ia64 atomic operations only compile with icc.

This commit changes the atomic operations so that they can be
compiled with either icc or gcc.

10 lines of code changed in 1 file:

livne 2005-04-26 15:35 Rev.: 29965

Added conservative ICE matlab code

0 lines of code changed in 1 file:

livne 2005-04-26 15:34 Rev.: 29964

Added conservative ICE initial results to the report

0 lines of code changed in 1 file:

livne 2005-04-26 15:11 Rev.: 29963

Oren's first ever SVN commit. Updated ice.m and added Zha-Bilgen code in matlab and fortran

484 lines of code changed in 6 files:

kzhang 2005-04-26 14:55 Rev.: 29961

added Corba component descriptions (xml); updated the PDE demo components; Simplify some interfaces in Builder components.

713 lines of code changed in 20 files:

callahan 2005-04-26 14:21 Rev.: 29959

Implement copyless NrrdSelectTime when the Time axis is the last one.

52 lines of code changed in 2 files:

guilkey 2005-04-26 14:08 Rev.: 29958

Return 0, 1 or 2 for box thickness direction instead of 1, 2 or 3.

3 lines of code changed in 1 file:

kzhang 2005-04-26 11:12 Rev.: 29956

added Corba component model

2411 lines of code changed in 28 files:

mdavis 2005-04-26 11:04 Rev.: 29954

fix memory leak in removeObject

1 lines of code changed in 1 file:

kzhang 2005-04-26 11:00 Rev.: 29953

added Corba component model

1 lines of code changed in 1 file:

kzhang 2005-04-26 10:59 Rev.: 29952

added CorbaService interfaces in the SIDL files

18 lines of code changed in 6 files:

ayla 2005-04-25 18:22 Rev.: 29949

Error messages should be displayed in text browser.
Unused timerEvent removed from Module class.

47 lines of code changed in 4 files:

callahan 2005-04-25 17:27 Rev.: 29948

Fix typo

1 lines of code changed in 1 file:

callahan 2005-04-25 17:12 Rev.: 29947

Don't delete tmp directory, for debugging

4 lines of code changed in 2 files:

callahan 2005-04-25 17:11 Rev.: 29946

Flush message stream

12 lines of code changed in 2 files:

callahan 2005-04-25 15:48 Rev.: 29945

Implement missing tcl restart function in NrrdSelectTime

4 lines of code changed in 1 file:

jeroen 2005-04-25 15:31 Rev.: 29944

Possible fix for Chris's stability problem with scirunremote

2 lines of code changed in 1 file:

worthen 2005-04-25 14:05 Rev.: 29942

Fix so the DataArchiver will create a timestep.xml with the correct time if a timestep restart occurred on that timestep

100 lines of code changed in 5 files:

worthen 2005-04-25 13:24 Rev.: 29941

Fix SGI optimized SimulationController while loop bug - endorsed by Dav :)

6 lines of code changed in 1 file:

worthen 2005-04-25 12:48 Rev.: 29940

Use level to query points in VariablePlotter

5 lines of code changed in 1 file:

jas 2005-04-25 12:41 Rev.: 29939

Add fPIC option for linux ppc.

146 lines of code changed in 2 files:

callahan 2005-04-25 10:43 Rev.: 29936

Block IO more datatypes

0 lines of code changed in 4 files:

callahan 2005-04-25 09:59 Rev.: 29935

Skeleton for InverseIPM module

380 lines of code changed in 2 files:

darbyb 2005-04-22 19:16 Rev.: 29932

Fix writers when using the Set button. If the file didn't exist, it was calling biopseFDialog_Done without the button type. Now it also passes the button type for that case. Sync with branch. (Bug 2608)

1 lines of code changed in 1 file:

ayla 2005-04-22 16:27 Rev.: 29930

Do port cleanup in Builder component and catch CCAExceptions.

13 lines of code changed in 2 files:

ayla 2005-04-22 16:26 Rev.: 29929

Do port cleanup in modules and catch CCAExceptions.

139 lines of code changed in 3 files:

ayla 2005-04-22 16:24 Rev.: 29928

Added more informative CCAException messages.

5 lines of code changed in 1 file:

irina 2005-04-22 14:12 Rev.: 29924

changes to TransIsoHyper -added failure to the implicit version

116 lines of code changed in 4 files:

dav 2005-04-22 13:53 Rev.: 29922

Copied original image from CVS side to fix images file.

0 lines of code changed in 2 files:

dav 2005-04-22 13:52 Rev.: 29921

Testing fixing images files.

0 lines of code changed in 1 file:

callahan 2005-04-22 10:37 Rev.: 29914

Add across execution accumulation capability to GatherFields. No GUI yet, is for PowerApps.

38 lines of code changed in 2 files:

callahan 2005-04-22 08:40 Rev.: 29913

Minor code cleanups

1 lines of code changed in 1 file:

callahan 2005-04-22 08:26 Rev.: 29912

Use block_io functions for Matrix Pio

40 lines of code changed in 4 files:

mjc 2005-04-22 08:26 Rev.: 29911

change round to Round to fix sgi compile

3 lines of code changed in 1 file:

callahan 2005-04-22 00:43 Rev.: 29910

Fix gcc 4.0 warning

4 lines of code changed in 1 file:

callahan 2005-04-22 00:41 Rev.: 29909

Fix gcc 4.0 compilation

0 lines of code changed in 1 file:

worthen 2005-04-21 22:12 Rev.: 29908

fix compile on sgi

1 lines of code changed in 1 file:

worthen 2005-04-21 21:54 Rev.: 29907

get dataArchive query (with a set of times) to be able to grab a cell index from a specified level

11 lines of code changed in 1 file:

worthen 2005-04-21 21:43 Rev.: 29906

get dataArchive query (with a set of times) to be able to grab a cell index from a specified level

29 lines of code changed in 2 files:

ayla 2005-04-21 19:13 Rev.: 29905

Deleted redundant print statements, added more informative exception messages.

14 lines of code changed in 2 files:

ayla 2005-04-21 19:11 Rev.: 29904

In framework::Services_impl::addProvidesPort: name conflict comparison should be against a Uses port.

23 lines of code changed in 1 file:

callahan 2005-04-21 19:08 Rev.: 29903

Change block_io to return capability so that it doesn't have to be chained together with the supports_block_io function (It can be more picky about which blocks it likes). Implement block_io more widely, use it for a 'safe' subset of the std::vector classes in PersistentSTL.h

204 lines of code changed in 5 files:

dmw 2005-04-21 18:00 Rev.: 29902

- Fixed ColorMap2D reader (committing Michael and Dav's fix)

1 lines of code changed in 1 file:

dav 2005-04-21 17:59 Rev.: 29901

Fix the macForceLoad() call. For some reason, we have to explicitly touch the PersistentTypeID to make it instantiate... Added Core/Geometry to sub.mk file.

33 lines of code changed in 2 files:

dav 2005-04-21 16:36 Rev.: 29900

Allow <esc> to close GUIs.

0 lines of code changed in 2 files:

dav 2005-04-21 16:35 Rev.: 29899

Allow <esc> to close status window.

1 lines of code changed in 1 file:

dav 2005-04-21 16:22 Rev.: 29898

Move the load file dialog to the mouse.

1 lines of code changed in 1 file:

dav 2005-04-21 16:21 Rev.: 29897

Fix bug with allocator when sci-malloc is disabled. (Moved the 'emtpy' lock/unlock routines and the '#if DISABLE_SCI_MALLOC' to the top of the #if block.

516 lines of code changed in 1 file:

borodai 2005-04-21 12:41 Rev.: 29896

Added functionality to recompute turbulence model only for the first substep
of RK and/or only at Nth timestep. This is just for testing purposes.
One has to set <turbModelCalcForAllRKSteps> tag in ExplicitSolver section
to control turbulence model recomputation in RK, and set <turbModelCalcFreq> in
ExplicitSolver section AND <recompileTaskgraph> to true in Arches section
to get turbulence model recomputation only at Nth timestep.

12 lines of code changed in 4 files:

mdavis 2005-04-20 17:14 Rev.: 29893

Fix Bug #2605. Delete disabled connection correctly

0 lines of code changed in 2 files:

callahan 2005-04-20 16:36 Rev.: 29892

Backwards compatable BinaryPiostream implementation for Version 1. Supports both reading and writing (writing not enabled from anywhere though). Successfully and identically recreates every field in SCIRunData/1.24.1 (made them all have same object versioning with branch, then we successfully read/write them and get the same result.

323 lines of code changed in 5 files:

yguo 2005-04-20 16:05 Rev.: 29891

Calculate particle temperature from grid for thermal stress analysis

12 lines of code changed in 1 file:

guilkey 2005-04-20 15:52 Rev.: 29890

Small code cleanup, this is primarily a check to see if I can make svn
work for me.

16 lines of code changed in 1 file:

worthen 2005-04-20 15:40 Rev.: 29889

remove file with colon in the filename

0 lines of code changed in 1 file:

callahan 2005-04-20 14:59 Rev.: 29888

Fix compilation, reinsert virtual io function

1 lines of code changed in 1 file:

mjc 2005-04-20 14:33 Rev.: 29887

added TimePort, TimeControls module, and added Time input port to ICUMonitor, made it slave to the TimeControls time

941 lines of code changed in 15 files:

mdavis 2005-04-20 14:32 Rev.: 29886

Save geometry size to .net file. Dont automatically save geometry to .scirun.geom, key off SCIRUN_GEOMETRY if it is set instead. Bug #2582, Clip saved geometry to actual screen size.

54 lines of code changed in 2 files:

jeroen 2005-04-20 14:23 Rev.: 29885

Fixed problems with sparsematrix reader, extra workspace is not copied anymore, added in scheme to edit matlab engine configuration file from GUI directly

105 lines of code changed in 5 files:

jeroen 2005-04-20 14:20

added bandwidth reduction scheme

923 lines of code changed in 9 files:

sparker 2005-04-20 12:57 Rev.: 29882

Added ability to compile outside of SCIRun (disabling Persistent stuff and type description stuff through #ifdef)

41 lines of code changed in 6 files:

sparker 2005-04-20 12:56 Rev.: 29881

Added ability to compile outside of SCIRun (disabling Persistent stuff)

14 lines of code changed in 3 files:

jas 2005-04-20 08:21 Rev.: 29877

Assign system defined max int to low_patch in createNeighborhood().

2 lines of code changed in 1 file:

dav 2005-04-19 18:06 Rev.: 29876

Fix syntax error in configure.ac

2271 lines of code changed in 2 files:

dav 2005-04-19 16:19 Rev.: 29875

Cannot use commas in AC macros... do not know why this didn't show up as a problem before...

437 lines of code changed in 2 files:

harman 2005-04-19 13:31 Rev.: 29874

small fix to -ignoreVariable option.

3 lines of code changed in 1 file:

dav 2005-04-19 13:22 Rev.: 29873

Removed redundant FFLAGS set. Indented windows check for easier reading. Added check for 'moved' thirdparty. Added 'lib' to sci_lib variable for --with-teem.

351 lines of code changed in 2 files:

worthen 2005-04-19 11:23 Rev.: 29871

Mods to get AMR Wave to work a bit better.

LoadBalancers (exception) - output patch connectivity to attempt to create a good set of patches per proc

Schedulers/3: when getting data from a virtual region, offset the variable before copyPatch

Variables: Add offset to Variable Bases, so you can do it for arbitrary variable types

Examples: interpolation fixes

373 lines of code changed in 15 files:

dav 2005-04-19 10:21 Rev.: 29869

Looks like Modules/Visualization now depends on Modules/Fields...

1 lines of code changed in 1 file:

harman 2005-04-19 09:32 Rev.: 29868

added AMR refluxing labels
mass_(X,Y,Z)_FC_flux
mom_(X,Y,Z)_FC_flux
sp_vol_(X,Y,Z)_FC_flux
int_eng_(X,Y,Z)_FC_flux

65 lines of code changed in 2 files:

harman 2005-04-19 08:51 Rev.: 29867

customBC_var_basket:
- using scinew instead of new.
- added constructor -- John

15 lines of code changed in 2 files:

harman 2005-04-19 07:32 Rev.: 29865

dumping out 16 digits of precision

1 lines of code changed in 1 file:

dav 2005-04-18 19:03 Rev.: 29864

Clean up tooltip.

2 lines of code changed in 1 file:

dav 2005-04-18 18:59 Rev.: 29863

Fixed several bugs (see bug #2610 for full details). Summary: check each field (individually) to make sure something has been entered by the user before creating the module.

32 lines of code changed in 1 file:

dav 2005-04-18 18:37 Rev.: 29862

Deleted these files as the functionality has moved to Core/Init.

0 lines of code changed in 4 files:

dav 2005-04-18 18:35 Rev.: 29861

Removed the left over MacForceLoad from Core/Datatypes.
Moved init.cc/h into Core/Init/ so that scirun main
and other programs (eg: converters) could access it.
Moved findLib from Dataflow/Network/PackageDB.h to
soloader to remove circular dependency. Updated
MacForceLoad to actually 'touch' the datatypes of
the variables it creates to that they truely will be
constructed. This fixes the strange behavior that
recently showed up in the trunk with respect to the
MacForceLoad not forcing the datatypes to load.

401 lines of code changed in 57 files:

dav 2005-04-18 18:06 Rev.: 29858

Moved Moulding and mmiller packages to retired dir.

0 lines of code changed in 2 files:

dav 2005-04-18 18:01 Rev.: 29857

Moving Morgan package to retired dir.

0 lines of code changed in 1 file:

dav 2005-04-18 18:00 Rev.: 29856

Moving McQ package to retired directory.

0 lines of code changed in 3 files:

slew 2005-04-18 17:44 Rev.: 29853

update in elc converter and other minor fixes

15 lines of code changed in 1 file:

kzhang 2005-04-18 15:31 Rev.: 29852

updated SCIRun2Ports.sidl for the new version of PDE components

21 lines of code changed in 1 file:

kzhang 2005-04-18 15:30 Rev.: 29851

added PDEdriver component

304 lines of code changed in 5 files:

callahan 2005-04-18 14:51 Rev.: 29850

Fix Matrix reading. Was writing int separate_raw_ variable and reading it as a bool. Now reads as int as well (backwards compatible, bug 2599

1 lines of code changed in 1 file:

kzhang 2005-04-18 14:05 Rev.: 29849

updated LinSolver component

24 lines of code changed in 2 files:

callahan 2005-04-18 12:59 Rev.: 29848

Share BinaryPiostream/BinarySwapPiostream code, fix gen_io oops in BinaryPiostream, clean up auto_istream and auto_ostream code, fix bug 2559 (broken on friday)

187 lines of code changed in 3 files:

dav 2005-04-18 11:50 Rev.: 29847

Added back (temporarily) building macForceLoad.

4 lines of code changed in 1 file:

allen 2005-04-18 11:26 Rev.: 29846

added a list for quantity selection so users know which values are bing used also cleanup naming

80 lines of code changed in 4 files:

allen 2005-04-18 11:23 Rev.: 29845

reduced the mesh restriction to similar meshes rather exact also cleaned up messages

53 lines of code changed in 1 file:

ayla 2005-04-18 10:32 Rev.: 29844

Updates to Ptolemy/SPA interface for move to SPA workflows.

308 lines of code changed in 17 files:

callahan 2005-04-16 01:22 Rev.: 29843

Use ProgressReporter interface to report errors in the Pstream system

282 lines of code changed in 12 files:

callahan 2005-04-15 20:49 Rev.: 29842

Scrunch Binary*Piostream classes into smaller functions, make BinarySwapPiostream write swapped fields

87 lines of code changed in 2 files:

sparker 2005-04-15 19:36 Rev.: 29841

Retire .cvsignore files

0 lines of code changed in 112 files:

callahan 2005-04-15 17:56 Rev.: 29840

More scrunching of common Pstreams code into shared functions

250 lines of code changed in 4 files:

callahan 2005-04-15 16:30 Rev.: 29838

in auto_istream, unget 4 items instead of 3 for endianness backwards compatability

1 lines of code changed in 1 file:

callahan 2005-04-15 16:27 Rev.: 29837

More Pstreams cleanup, rearrange Pstream classes so that they are comparable, push common code up the class hierarchy.

1386 lines of code changed in 4 files:

bigler 2005-04-15 15:17 Rev.: 29836

Block calls to petsc code with a ifdef PetscFilter.

3 lines of code changed in 1 file:

callahan 2005-04-15 14:47 Rev.: 29835

Remove unneeded Core/Persistent/Pstreams.h includes

0 lines of code changed in 14 files:

callahan 2005-04-15 13:31 Rev.: 29834

Resurrect Core/Datatypes/MacForceLoad.{cc,h}

99 lines of code changed in 2 files:

callahan 2005-04-15 13:04 Rev.: 29833

Remove more dead files

0 lines of code changed in 2 files:

callahan 2005-04-15 13:02 Rev.: 29832

minor cleanups, formatting for Pstreams.cc

1334 lines of code changed in 1 file:

dav 2005-04-15 12:40 Rev.: 29831

Fixed ^M substitution problem from CVS converson (for Insight package)

8 lines of code changed in 2 files:

callahan 2005-04-15 12:17 Rev.: 29830

minor cleanup of the FastPiostream class code, use const char* for errors instead of string (avoids copy).

168 lines of code changed in 2 files:

dav 2005-04-15 11:59 Rev.: 29829

Removed files that were resurrected in the CVS-SVN conversion but that should have remained dead.

0 lines of code changed in 21 files:

sparker 2005-04-15 11:53 Rev.: 29828

Fixed more binary files

5081 lines of code changed in 22 files:

sparker 2005-04-15 11:38 Rev.: 29827

Fixed binary files. Removed svn:eol-style keyword and copied new versions over from CVS

9397 lines of code changed in 75 files:

dav 2005-04-15 11:33 Rev.: 29826

(My first atomic commit... I'm learning! :-) MacForceLoad is now in main/init.cc (and soon will be moving to its own directory as it is required by a number of libs).

0 lines of code changed in 3 files:

sparker 2005-04-15 09:26 Rev.: 29825

Restored splash screen

0 lines of code changed in 2 files:

sparker 2005-04-15 09:25 Rev.: 29824

Removed eol-style

0 lines of code changed in 1 file:

dav 2005-04-15 08:42 Rev.: 29823

Removed previous test commit

0 lines of code changed in 1 file:

dav 2005-04-15 08:39 Rev.: 29822

Testing non-authenticated checkin

2 lines of code changed in 1 file:

sparker 2005-04-14 20:37 Rev.: 29821

another scirun commit

0 lines of code changed in 1 file:

sparker 2005-04-14 20:36 Rev.: 29820

another uintah test

1 lines of code changed in 1 file:

sparker 2005-04-14 20:35 Rev.: 29819

One more uintah test

0 lines of code changed in 1 file:

sparker 2005-04-14 20:15 Rev.: 29818

One last test?

0 lines of code changed in 2 files:

sparker 2005-04-14 20:14 Rev.: 29817

test multiple commit e-mail

0 lines of code changed in 4 files:

sparker 2005-04-14 20:10 Rev.: 29816

test uintah commit e-mail

0 lines of code changed in 1 file:

sparker 2005-04-14 20:00 Rev.: 29815

Test commit e-mail

1 lines of code changed in 1 file:

allen 2005-04-14 15:56 Rev.: 29810

added Frenet Frame module

99 lines of code changed in 1 file:

allen 2005-04-14 15:50 Rev.: 29809

added index check

10 lines of code changed in 1 file:

allen 2005-04-14 15:50 Rev.: 29808

added full padding functionality

48 lines of code changed in 3 files:

allen 2005-04-14 15:49 Rev.: 29807

added index passing

133 lines of code changed in 3 files:

allen 2005-04-14 15:41 Rev.: 29806

made get_dim part of the mesh base class

1 lines of code changed in 1 file:

callahan 2005-04-14 15:39 Rev.: 29805

Fix data wrapping problem when min/max do not match data, bug #2584 (from v1_24_0 branch)

5 lines of code changed in 1 file:

allen 2005-04-14 15:38 Rev.: 29804

added Frenet Frame module

892 lines of code changed in 6 files:

callahan 2005-04-14 15:06 Rev.: 29802

Preliminary add of DenseColMajMatrix class, not used yet

917 lines of code changed in 3 files:

callahan 2005-04-14 11:09 Rev.: 29800

Copy properties from source into destination, bug #2587

4 lines of code changed in 1 file:

slew 2005-04-14 10:35 Rev.: 29799

correction of neurofem execution file name and other bug fixes

4 lines of code changed in 1 file:

irina 2005-04-13 17:42 Rev.: 29798

Added failure to the implicit model.

519 lines of code changed in 2 files:

irina 2005-04-13 17:41 Rev.: 29797

Updated failure.

25 lines of code changed in 2 files:

callahan 2005-04-13 15:51 Rev.: 29796

Various fixes, include simple par file

148 lines of code changed in 1 file:

slew 2005-04-13 11:42 Rev.: 29793

neurofem converter update

222 lines of code changed in 1 file:

guilkey 2005-04-13 11:29 Rev.: 29792

Cleaned this up a bit, replaced *iter with c, got rid of Yajun's tab's
and poor formatting.

0 lines of code changed in 2 files:

harman 2005-04-13 10:59 Rev.: 29791

setBCType()
- added code to determine which faces are on the coarse/fine interface.

getFaceCellIterator()
- added an option to iterate over the cells that are along the interior face
of patch face.

65 lines of code changed in 1 file:

harman 2005-04-13 10:54 Rev.: 29790

added getCoarseFineInterfaceFaces()
- returns a vector of patch faces that lie on a coarse/fine
interface. needed by AMR

10 lines of code changed in 1 file:

jas 2005-04-13 10:26 Rev.: 29788

Don't break the string that is in ProblemSetupException().

1 lines of code changed in 1 file:

yguo 2005-04-13 09:22 Rev.: 29787

add in parameter "outputJ". If it is "true", output J integral. Otherwise if it is "false" (by default), output stress intensity.

7 lines of code changed in 3 files:

callahan 2005-04-12 18:04 Rev.: 29785

remove global_scale, typo (from branch)

0 lines of code changed in 1 file:

callahan 2005-04-12 16:36 Rev.: 29783

Make min 'Window Width' be 1 instead of 0, 0 is an invalid UnuJhisto width (from branch)

3 lines of code changed in 1 file:

callahan 2005-04-12 16:27 Rev.: 29780

Fix crash bug if UnuJhisto min/max are the same value(from 1.24.0 branch)

9 lines of code changed in 1 file:

borodai 2005-04-12 15:51 Rev.: 29777

Things from unfinished Arches ups files cleanup. Just to sync my desktop to
cvs before it goes down

194 lines of code changed in 21 files:

anup 2005-04-12 15:30 Rev.: 29775

Added ZerilliArmstrong plasticity model.

19 lines of code changed in 2 files:

anup 2005-04-12 15:28 Rev.: 29774

First cut for Zerilli-Armstrong model.

572 lines of code changed in 2 files:

worthen 2005-04-11 16:41 Rev.: 29773

Remove LoadBalancer files (they moved to CCA/Components/LoadBalancers)

0 lines of code changed in 12 files:

jeroen 2005-04-11 15:38 Rev.: 29772

Disabled compilation of converters as they should be obsolete by now, better alternatives exist now

0 lines of code changed in 2 files:

jeroen 2005-04-11 15:36 Rev.: 29771

add removed files with proper names.

3376 lines of code changed in 16 files:

jeroen 2005-04-11 15:35 Rev.: 29770

remove ill named files

0 lines of code changed in 10 files:

jeroen 2005-04-11 15:32 Rev.: 29769

remove illnamed files

0 lines of code changed in 5 files:

oscar 2005-04-11 15:28 Rev.: 29768

fixed problem with not removing callbacks from scheduler's list

15 lines of code changed in 1 file:

yguo 2005-04-11 12:00 Rev.: 29767

Add in some comments

12 lines of code changed in 1 file:

callahan 2005-04-11 11:43 Rev.: 29766

More ForwardIPM updates

188 lines of code changed in 4 files:

borodai 2005-04-11 11:41 Rev.: 29765

Otherwise, Gao gets confused

73 lines of code changed in 42 files:

jas 2005-04-11 11:37 Rev.: 29764

Fix crash when multiple patches are used.

1 lines of code changed in 1 file:

jeroen 2005-04-11 11:32 Rev.: 29763

New modules

2165 lines of code changed in 21 files:

jeroen 2005-04-11 11:30 Rev.: 29762

activate new subclasses in sub.mk

4 lines of code changed in 1 file:

jeroen 2005-04-11 11:29 Rev.: 29761

Added new Field class, so property manager works fine with a Field as property

0 lines of code changed in 4 files:

jeroen 2005-04-11 11:28 Rev.: 29760

Tools for adding and removing properties in fields

1298 lines of code changed in 7 files:

jeroen 2005-04-11 11:27 Rev.: 29759

Code for some simple management tools

720 lines of code changed in 5 files:

jeroen 2005-04-11 11:25 Rev.: 29758

New subclass

28 lines of code changed in 1 file:

oscar 2005-04-10 20:52 Rev.: 29757

Updated to save pictures now

7 lines of code changed in 2 files:

oscar 2005-04-10 20:52 Rev.: 29756

Updated to use scheduler callback when network is done. also saves pictures now

48 lines of code changed in 2 files:

guilkey 2005-04-10 18:06 Rev.: 29755

Adding the ThermalEnergy reduction variable so we can track the total increase
in thermal energy as in the explicit code.

6 lines of code changed in 1 file:

guilkey 2005-04-08 18:37 Rev.: 29754

Get heat conduction working for problems with more than one material.

32 lines of code changed in 1 file:

guilkey 2005-04-08 18:34 Rev.: 29753

Initialize pIntHeatRate for all materials, rigid and otherwise. Also,
add the pIntHeatRate stuff to the HypoElasticImplicit model.

39 lines of code changed in 2 files:

guilkey 2005-04-08 17:57 Rev.: 29752

Clean up some of the nastiness in pursuit of a bug.

23 lines of code changed in 1 file:

bigler 2005-04-08 17:04 Rev.: 29751

threadexit creates several producing threads and one consuming thread. After a certain amount of work the consuming thread starts a shutdown process. The program should exit normally. parallel exercises the Parallel call in the Thread library.

316 lines of code changed in 4 files:

bigler 2005-04-08 16:59 Rev.: 29750

Added test15.cc which pegs the allocator with several threads while several more threads are trying to fork. It's designed to chase a bug in linux with mutexes and forks.

236 lines of code changed in 3 files:

bigler 2005-04-08 16:56 Rev.: 29749

Don't try to look for scene.rs anymore.

6 lines of code changed in 1 file:

bigler 2005-04-08 16:50 Rev.: 29748

Last minute changes.

0 lines of code changed in 6 files:

bigler 2005-04-08 16:49 Rev.: 29747

Add this library to the list of those needed to build the scimodules target.

3 lines of code changed in 1 file:

guilkey 2005-04-07 18:41 Rev.: 29735

Adding labels to get the multimaterial heat conduction working in ImpMPM.

5 lines of code changed in 2 files:

guilkey 2005-04-07 17:20 Rev.: 29734

Instead of requiring a contact direction, use getWithDefault, to be
backwards compatible with RigidBodyContact.

4 lines of code changed in 1 file:

jeroen 2005-04-07 14:42 Rev.: 29732

Added preparations for multifile support using nrrds

185 lines of code changed in 2 files:

callahan 2005-04-07 14:29 Rev.: 29731

More skeletons for file writer functions

156 lines of code changed in 1 file:

jeroen 2005-04-07 13:59 Rev.: 29730

bug fixes in cardiowave file writers

17 lines of code changed in 1 file:

zgao 2005-04-07 12:23 Rev.: 29726

fixed a bug in localized dynamic procedure model

21 lines of code changed in 2 files:

callahan 2005-04-06 22:47 Rev.: 29724

Fill out ForwardIPM command setup

88 lines of code changed in 1 file:

bigler 2005-04-06 21:10 Rev.: 29720

Remove old library reference since Uintah code reorganization.

1 lines of code changed in 1 file:

guilkey 2005-04-06 20:05 Rev.: 29719

Added a timestep stability check for the heat conduction, which is
currently explicit.

16 lines of code changed in 1 file:

callahan 2005-04-06 18:35 Rev.: 29718

More ForwardIPM guts

9 lines of code changed in 1 file:

callahan 2005-04-06 18:17 Rev.: 29717

Use correct NeuroFEM module port names and types

9 lines of code changed in 2 files:

callahan 2005-04-06 18:06 Rev.: 29716

Add NeuroFEM module prototypes

414 lines of code changed in 7 files:

jas 2005-04-06 16:40 Rev.: 29714

Fix compiler warnings.

3 lines of code changed in 4 files:

jas 2005-04-06 16:26 Rev.: 29713

Fix warning.

1 lines of code changed in 1 file:

skumar 2005-04-06 15:45 Rev.: 29712


NonAdiabaticTable: at present just a copy of AdiabaticTable, to be used
for calculations with heat loss (radiation)

1077 lines of code changed in 4 files:

skumar 2005-04-06 15:40 Rev.: 29711


Remove tablename from names of dynamically created variables using input
file specification

1 lines of code changed in 1 file:

guilkey 2005-04-06 15:30 Rev.: 29710

SpecifiedBodyContact is now a superset of RigidBodyContact, so if
"rigid" is specified in the input file, instantiate SBC instead. Also,
remove RBC from the makefile.

2 lines of code changed in 3 files:

ayla 2005-04-06 14:17 Rev.: 29709


Adding wrappers for smarter Java global references.

134 lines of code changed in 3 files:

callahan 2005-04-06 14:15 Rev.: 29708

minor cleanups

13 lines of code changed in 1 file:

jas 2005-04-06 13:57 Rev.: 29707

Remove some tests that are not found in RT and add foam_crush.

1 lines of code changed in 1 file:

callahan 2005-04-06 13:56 Rev.: 29706

Unvirtual Matrix::scalar_multiply, consolidate implementation

14 lines of code changed in 8 files:

callahan 2005-04-06 13:43 Rev.: 29705

Remove Matrix::GetRowNonzeros, no longer in use

0 lines of code changed in 7 files:

callahan 2005-04-06 13:02 Rev.: 29704

Select new required Matrix tab

0 lines of code changed in 2 files:

dgroulx 2005-04-06 12:49 Rev.: 29703

Changed the makeSciButtonPanel to use the new optional argument -force_bottom,
now the Sci button panel appears at the bottom as it should.

28 lines of code changed in 5 files:

dgroulx 2005-04-06 12:48 Rev.: 29702

Added an option argument "-force_bottom" to the makeSciButtonPanel function.
This will force the button frame to be packed with the setting -side bottom,
which fixes some layout issues in the GridVisualizer UI.

21 lines of code changed in 1 file:

abrydon 2005-04-06 12:06 Rev.: 29701

Fixes for IRIX build - one my fault, one IRIX's

Dont have static initializer value in header.

dont cast size to int for when we have more than 2^31 materials.

5 lines of code changed in 1 file:

callahan 2005-04-06 11:56 Rev.: 29700

use airStrdup, handles NULL better

31 lines of code changed in 11 files:

callahan 2005-04-06 11:49 Rev.: 29699

use airStrdup, handles NULL better

34 lines of code changed in 4 files:

jas 2005-04-06 10:32 Rev.: 29697

Automatically start and stop lam when on inferno.

7 lines of code changed in 1 file:

jas 2005-04-06 08:59 Rev.: 29696

Add some debugging variables.

4 lines of code changed in 1 file:

jas 2005-04-06 08:57 Rev.: 29695

Add heat conduction.

32 lines of code changed in 1 file:

harman 2005-04-06 07:31 Rev.: 29694

linearInterpolation()
-added some ascii art

34 lines of code changed in 1 file:

borodai 2005-04-05 22:05 Rev.: 29693

Cleanup after latest commits, or return back to previuos versions

1 lines of code changed in 7 files:

jas 2005-04-05 21:25 Rev.: 29692

Rearrange includes for gcc-3.4.

1 lines of code changed in 1 file:

jas 2005-04-05 21:15 Rev.: 29691

Move OdtData to its own file so it will compile with gcc-3.4.

187 lines of code changed in 7 files:

zgao 2005-04-05 20:06 Rev.: 29690

*** empty log message ***

0 lines of code changed in 1 file:

zgao 2005-04-05 20:04 Rev.: 29689

add localized dynamic procedure model, reconstruct mixed model and add vorticity calculation by Zhaosheng Gao on Apr 05 2005.

65 lines of code changed in 12 files:

jas 2005-04-05 17:46 Rev.: 29688

Inherit FractureMPM from SerialMPM.
Fix compilation warnings.

5 lines of code changed in 4 files:

jas 2005-04-05 17:45 Rev.: 29687

Add option not to use mpi in running the tests with multi-patches.

14 lines of code changed in 1 file:

yguo 2005-04-05 17:29 Rev.: 29686

add in GVelocityInterpLabel.

5 lines of code changed in 2 files:

yguo 2005-04-05 17:14 Rev.: 29684

Upgrade crack algorithms based upon the latest version of SerialMPM.

144 lines of code changed in 9 files:

dav 2005-04-05 17:14 Rev.: 29683

Updated name of variable from displaymode to 3d_mode to match change in .tcl file.

0 lines of code changed in 2 files:

yguo 2005-04-05 17:12 Rev.: 29682

Upgrade FractureMPM based upon the latest version of SerialMPM.

2069 lines of code changed in 1 file:

guilkey 2005-04-05 16:51 Rev.: 29681

Adding virtual functions to allow the models to have an MPMLabel passed
into them.

9 lines of code changed in 3 files:

guilkey 2005-04-05 16:49 Rev.: 29680

Adding projection of a bulk particle temperature to the nodes->cell centers.

168 lines of code changed in 2 files:

guilkey 2005-04-05 16:43 Rev.: 29679

Push the MPMLabel into the models. Some of them (SteadyBurn) need access
to the same set of Labels that the MPM code is using.

9 lines of code changed in 1 file:

yguo 2005-04-05 16:41 Rev.: 29678

Upgrade FractureMPM based upon the latest version of SerialMPM (April 1, 2005).

322 lines of code changed in 1 file:

zgao 2005-04-05 15:04 Rev.: 29676

add localized dynamic procedure model and vorticity calculation by zhaosheng gao 4/5/2005

6514 lines of code changed in 23 files:

abrydon 2005-04-05 14:58 Rev.: 29675

Allow multiple contact conditions to be imposed; this is achieved
through a CompositeContact, built by the ContactFactory, that has
an ordered list of Contacts.

Contacts previously used a single scheduler Task; they are now
UintahParallelComponents with their own task manager.

Moved initialization of frictionalWork in to CompositeContact, since
it was being set to zero in each model (unless fracture is used).
This looks messy - could be clean up.

The specified boundary conditions can now be selected with
<contact>
<type>specified_velocity</type>
....
</contact>

Contact conditions can be applied to specific materials with
<contact>
....
<materials>[0,1]</materials>
</contact>
The logic is that all materials in the list must be in a cell for the
contact condition to be applied.

In principal, the syntax should be backward compatible with the
previous file format (fingers crossed!).

An example usage is in
Packages/Uintah/StandAlone/Inputs/MPM/twoblock-single-rigid.ups

645 lines of code changed in 35 files:

dav 2005-04-05 14:55 Rev.: 29674

Give full disclosure for .scirunrc update.

8 lines of code changed in 1 file:

dav 2005-04-05 14:55 Rev.: 29672

Copy to correct file name. Syncs with changes in main.cc on branch.

12 lines of code changed in 1 file:

dgroulx 2005-04-05 14:20 Rev.: 29669

Removed debugging puts statements from previous commit.

0 lines of code changed in 1 file:

dgroulx 2005-04-05 14:18 Rev.: 29668

In the GridViewer UI, moved the dynamically generated list of materials into
a scrolling pane.

47 lines of code changed in 1 file:

dav 2005-04-05 13:39 Rev.: 29667

(Sync with Branch) Indented, untabified. Added a few comments. Added check for an error that only happens once in a while (due to race condition?) but causes segfault when triggered.

287 lines of code changed in 1 file:

dgroulx 2005-04-05 12:33 Rev.: 29665

Added tooltips for the material buttons. Also added the moveToCursor command
to these 3 modules, however this is not working. Whenever the GUI of a modules
takes awhile to load the command fails. Only when the GUI loads quickly
will the new window be moved to the cursor location.

9 lines of code changed in 3 files:

dgroulx 2005-04-05 11:48 Rev.: 29664

Replaced the "Close" button at the bottom of these windows with the standard
makeSciButtonPanel dialog

2 lines of code changed in 2 files:

callahan 2005-04-05 11:09 Rev.: 29663

Update filetype selection when creating file dialog, bug #2554

9 lines of code changed in 1 file:

callahan 2005-04-05 10:02 Rev.: 29661

Remove indirection pointer, compute indices instead

209 lines of code changed in 2 files:

callahan 2005-04-04 21:28 Rev.: 29660

Minor cleanups

6 lines of code changed in 1 file:

callahan 2005-04-04 21:13 Rev.: 29659

Enable NrrdWriter plugins

159 lines of code changed in 4 files:

harman 2005-04-04 19:16 Rev.: 29658

removed hardwired boundary conditions for AMR

0 lines of code changed in 1 file:

jeroen 2005-04-04 18:55 Rev.: 29657

activated Nrrd plugins

4 lines of code changed in 3 files:

yguo 2005-04-04 17:28 Rev.: 29656

Extend the algorithms of heat conduct analysis to the problems with cracks.

206 lines of code changed in 1 file:

callahan 2005-04-04 16:43 Rev.: 29655

Add NrrdReader plugin support

109 lines of code changed in 4 files:

callahan 2005-04-04 15:18 Rev.: 29652

Minor cleanups

86 lines of code changed in 2 files:

callahan 2005-04-04 15:01 Rev.: 29651

Add NrrdIEPlugin support structure

420 lines of code changed in 6 files:

abrydon 2005-04-04 14:47 Rev.: 29650

Update velocity fields to make compatible with RigidContact.

allow for stop time.

if no file specified, act like rigid contact.

allow arbritrary contact material.

i think this now implements a superset of RigidContact.

237 lines of code changed in 2 files:

jas 2005-04-04 13:50 Rev.: 29647

Change back to non-static d_particleState and d_particleState_preReloc.

2 lines of code changed in 2 files:

callahan 2005-04-04 13:22 Rev.: 29646

Use row swapping for DenseMatrix inverse/solve, bug #2577

18 lines of code changed in 2 files:

abrydon 2005-04-04 12:26 Rev.: 29645

Minor code clean up.

Due to my stupid trick of making base variables public, changing the
name of the variables to fit Uintah coding standards meant the wrong
output directories were created. Since I was too lazy to check the
streams after writing, it silently failed.

432 lines of code changed in 1 file:

harman 2005-04-04 12:07 Rev.: 29644

accumulateEnergySourcesSinks()
- Now saving the conduction source of energy (heatCond_src_CCLabel)

25 lines of code changed in 2 files:

harman 2005-04-04 12:04 Rev.: 29643

added label: heatCond_src_CC
deleted labels: mom_comb_CC & burnedMass_CC (not being used)

4 lines of code changed in 2 files:

jeroen 2005-04-04 12:00 Rev.: 29642

Startup for adding plugins

0 lines of code changed in 2 files:

jeroen 2005-04-04 11:58 Rev.: 29641

Added writers for most CardioWave file formats

376 lines of code changed in 1 file:

jas 2005-04-04 11:47 Rev.: 29640

Use static storage for d_particleState and d_particleState_preReloc.

5 lines of code changed in 2 files:

worthen 2005-04-04 10:40 Rev.: 29639

Fix irix compile

0 lines of code changed in 2 files:

jas 2005-04-04 09:34 Rev.: 29638

Use ErrnoException instead of ErrornoException.

1 lines of code changed in 1 file:

oscar 2005-04-03 23:47 Rev.: 29637

iterate runnable loops over arrays that were received from ptolemy now. some testing done

64 lines of code changed in 2 files:

oscar 2005-04-03 23:45 Rev.: 29636

Updated to get parameters from ptolemy that describe the work to be done

42 lines of code changed in 2 files:

darbyb 2005-04-03 13:14 Rev.: 29635

Use auto_ostream method.

4 lines of code changed in 2 files:

darbyb 2005-04-03 13:13 Rev.: 29634

now written out in all Piostream headers at BIG or LIT. Old
files were written out using XDR which forced big endianness.
New files are written out based on endianness of machine.
When reading in a file, if the endianness of the machine and
the file is the same, the BinaryPiostream is used. If they
are different, the BinarySwapPiostream is used which reads
in the bytes and swaps them. When writing, always write the
using the endianness of the machine.

PERSISTENT_VERSION now 2.

src/Core/Persistent/Persistent.h
=================================
Added enumerations for endianness and an auto_ostream method.



src/Core/Persistent/Persistent.cc
=================================
Modified auto_istream function to look at endianness of
file and return appropriate Binary/BinarySwap Piostream.

Added auto_ostream method to match auto_istream method.

Modifed readHeader function to return the file endianness.



src/Core/Persistent/Pstreams.h
================================
Remove includes to rpc/xdr.h and rpc/types.h.

Remove XDR struct in BinaryPiostream.

Add BinarySwapPiostream class.




src/Core/Persistent/Pstreams.cc
===============================
Remove includes to rpc/xdr.h and rpc/types.h.

Remove XDR code.

Change PERSISTENT_VERSION to be 2.

Change calls to readHeader to include the file_endianness.

Open up FastPiostream to be "rb" and "wb".

Fix all Piostreams to read in header of size 16 when the version
is greater than 1.

Change BinaryPiostream to use fread, fwrite to read in
data instead of calls to XDR.

Implement BinarySwapPiostream methods to read/write data
using fread and fwrite and then swap bytes.

1028 lines of code changed in 4 files:

worthen 2005-04-01 19:21 Rev.: 29632

implement a selectPatches cache which considerably improves taskgraph performance AND considerably increases memory consumption. disabled by default - define BRYAN_SELECT_CACHE

62 lines of code changed in 2 files:

worthen 2005-04-01 19:19 Rev.: 29631

Add member so the simulation knows when it is in a copy data step

10 lines of code changed in 2 files:

worthen 2005-04-01 19:17 Rev.: 29630

Print the copy data time for a regrid

6 lines of code changed in 1 file:

worthen 2005-04-01 19:16 Rev.: 29629

Up the Progressive Warning repeat count

2 lines of code changed in 1 file:

worthen 2005-04-01 19:16 Rev.: 29628

Maybe perfect copy data

17 lines of code changed in 2 files:

worthen 2005-04-01 19:09 Rev.: 29627

Get big parallel MPM runs to run (fix neighborhood)

38 lines of code changed in 1 file:

worthen 2005-04-01 19:07 Rev.: 29626

Full AMR Wave implementation complete with interpolation. It currently finishes running on 2 levels, and soon I will make sure the numbers are correct and get it to complete on 3+ levels

294 lines of code changed in 4 files:

callahan 2005-04-01 17:19 Rev.: 29624

Use scalar_multiply

4 lines of code changed in 1 file:

abrydon 2005-04-01 17:16 Rev.: 29623


Fixes for bard:

Create correct output directory for histograms.
check for success after writing histogram (internal error otherwise)
make help message more prettier ....

20 lines of code changed in 1 file:

jeroen 2005-04-01 16:57 Rev.: 29622

Added basic documentation on module

88 lines of code changed in 1 file:

jeroen 2005-04-01 16:16 Rev.: 29621

fix endian swapping

2 lines of code changed in 1 file:

jeroen 2005-04-01 16:06 Rev.: 29617

More bug fixes and added full support for file sizes over 2Gb, open instead of fopen and lseek instead of fseek

480 lines of code changed in 1 file:

dav 2005-04-01 15:58 Rev.: 29616

Fixes compilation on SGI.

0 lines of code changed in 4 files:

dgroulx 2005-04-01 15:49 Rev.: 29615

Changed the get_matl_from_particleID to use a ConsecutiveRangeSet instead of
assuming that the material IDs are in a contiguous list.

16 lines of code changed in 2 files:

jeroen 2005-04-01 14:27 Rev.: 29614

bug fixes to better deal with hand edited nrrd header files

189 lines of code changed in 2 files:

harman 2005-04-01 14:11 Rev.: 29613

setupRHS()
- deleted an extra delT in massExchange term. It's already incorporated
in the ModelMassSrc.

3 lines of code changed in 1 file:

dgroulx 2005-04-01 14:06 Rev.: 29612

Added a 'Export' button to the right of the 'Graph' and 'Table' buttons
that will export the selected materials in as a gnuplot-friendly text file.
Also modified the UI so that the 'Materials' button will be highlighed red
when materials within it are selected.

220 lines of code changed in 1 file:

oscar 2005-04-01 13:13 Rev.: 29611

updated the libs that are linked in so i could use the viewer message

3 lines of code changed in 1 file:

bigler 2005-04-01 13:04 Rev.: 29610

No longer need to wait for showing_scene to == 0 to change the number of threads. This allows renderFrameless to change the number of threads no matter what showing_scene is (because it can change when resizing and it doesn't oscilate. When creating a Worker call set_rendering_scene in order to make sure the new Worker is on the same page as the rest of them.

3 lines of code changed in 1 file:

bigler 2005-04-01 13:03 Rev.: 29609

Add a function to change rendering_scene. rendering_scene is now initialized in the constructure instead of run(), so that any calls to set_rendering_scene can actually take an effect.

0 lines of code changed in 4 files:

bigler 2005-04-01 12:15 Rev.: 29608

Resizing of frameless window now works. This requires the switching of which Image buffer is used for rendering.

80 lines of code changed in 1 file:

bigler 2005-04-01 12:14 Rev.: 29607

Add include of DpyPrivate for looking at the showing_scene variable of Dpy.

1 lines of code changed in 1 file:

bigler 2005-04-01 12:13 Rev.: 29606

Remove some debugging code. If the image being shown has changed on the Dpy side change it here.

21 lines of code changed in 1 file:

jeroen 2005-04-01 01:20 Rev.: 29603

Addition of newly added files

0 lines of code changed in 2 files:

jeroen 2005-04-01 01:19 Rev.: 29602

Readers for all types of CardioWave files currently used in our research

871 lines of code changed in 4 files:

jeroen 2005-04-01 01:18 Rev.: 29601

Class for reading selected parts of NRRD file

844 lines of code changed in 2 files:

jeroen 2005-04-01 01:16 Rev.: 29600

new class of modules for DataIO

1 lines of code changed in 1 file:

jeroen 2005-04-01 01:15 Rev.: 29599

Adding new module for reading selected segments from NRRD file into matrix or nrrd object

909 lines of code changed in 5 files:

jeroen 2005-04-01 01:11 Rev.: 29598

removed ifdef for OSX, not needed anymore with new Package init system.

2 lines of code changed in 1 file:

March 2005 »

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