Remove lock in MPISchdeduler::processMPIRecvs
69 lines of code changed in 4 files:
Revert a change to MPIScheduler. Lock removel in processMPIRecvs is ready in branch, just need to pull over the full set of changes.
32 lines of code changed in 2 files:
More Task cleanup.
253 lines of code changed in 3 files:
Continuing with infrastrucutre cleanup and refactoring:
-----------------------------------------------
- White space, coding standards, indentation, remove tabs.
- Line up some variables to make them easier to read.
- Use of 80+ columns of text - this was somewhat archaic
- Use {} for if/else clauses even if they are only one line long.
- Put "else" and "else if" on a new line. The added white space makes following the branching much easier.
- remove instances of "using namespace::std" when found.
- nullptr checks
Class Member Naming Conventions:
-----------------------------------------------
m_var_name - class member
s_var_name - static
g_var_name - global
t_var_name - thread local
309 lines of code changed in 11 files:
Added print() method that prints values relative to this node. Used for debugging.
Example:
Node Name: material name => Steel Ring
getNextSibling(): material
getParent(): MPM
findNextBlock(): material
Node Name: material name => reactant
getNextSibling(): contact
getParent(): MPM
findNextBlock(): contact
44 lines of code changed in 2 files:
Undo last commit
0 lines of code changed in 2 files:
this is a test.
2 lines of code changed in 1 file:
Fixing a bug in the BrownSource term which was causing a label mix-up
resulting in zero soot.
Also moving the Kokkos Solver to adopt the new task interface with task
packing.
35 lines of code changed in 3 files:
- Refinements on the new scheduling interface.
- Arches tasks can now be packed when appropriate into super tasks.
- Catching more errors in scheduling when packed or unpacked tasks are
present to prevent user from scheduling variable needs incorrectly.
202 lines of code changed in 23 files:
Merge with trunk.
442 lines of code changed in 10 files:
Add new property (Tabulated) evaluators.
670 lines of code changed in 11 files:
Also missed variable name changes inside a "#if CUDA" section in the last commit.
M CCA/Components/Schedulers/DetailedTasks.cc
- Fix name changes for class variables.
task -> d_task
patches -> d_patches
matls -> d_matls
M CCA/Components/Wasatch/Expressions/BoundaryConditions/BoundaryConditions.h
- Cosmetic - remove a floating ";" that was causing a compiler warning.
6 lines of code changed in 2 files:
M CCA/Components/Schedulers/TaskGraph.cc
- Missed a variable name change (patches to d_patches) inside an ASSERT in the last commit.
1 lines of code changed in 1 file:
More (mostly cosmetic-ish) code cleanups.
- Added some white space to make for easier reading of code.
- Swatted some endls.
M CCA/Components/DataArchiver/DataArchiver.cc
- outputPS() function didn't do anything so removing it.
M CCA/Components/Schedulers/DetailedTasks.h
M CCA/Components/Schedulers/DetailedTasks.cc
- Put one line functions in .h files on same line to make the spec easier to read by the user.
- Mark class variables with "d_" (matching the few that were already done that way in this file) in order
to be able to know a class variable by sight when I see it in the code. (eg: d_task, d_patches, etc).
M CCA/Components/Schedulers/OnDemandDataWarehouse.h
M CCA/Components/Schedulers/OnDemandDataWarehouse.cc
- Updated a few constructor parameters with const (as they don't change in the function).
M CCA/Components/Schedulers/TaskGraph.cc
- Handle new Task class variables names (from DetailedTask above) - eg: 'd_task' instead of 'task'.
- Alan, I'm pretty sure I merged this right, but there were a lot of conflicts... if I messed up
something from your commit, I apologize - just let me know and I'll look at it in more detail and fix
it. -Dav
M CCA/Components/SimulationController/AMRSimulationController.cc
- Alan, same commit as previous file.
- Run through "diff -w" to more easily parse changes.
- Many of the DebugStreams are local to this file, so make them 'static'.
- Untabify / white space.
- Use "using namespace std" as we use this everywhere else.
M CCA/Ports/SimulationInterface.h
M CCA/Ports/SimulationInterface.cc
- White space / alignment for readability.
- Removed outputPS() interface as it isn't used by anyone.
- Moved the empty preGridProblemSetup() into the .cc file... can't remember why I did this exactly,
but most likely I was debugging in there and didn't want to have to recompile all of Uintah
every time. Also might have wanted to make it pure virtual (I think all the stubs in this interface
probably should be pure virtual), but I think this was non-trivial to do.
- Untabify.
- Use {} with if's.
M StandAlone/inputs/ARCHES/RMCRT/rmcrt_bm1_DO.ups
M StandAlone/inputs/ARCHES/RMCRT/rmcrt_bm1_ML.ups
M StandAlone/inputs/Examples/RMCRT_+Domain_ML.ups
M StandAlone/inputs/Examples/RMCRT_ML.ups
M StandAlone/inputs/Examples/RMCRT_bm1_DO.ups
M StandAlone/inputs/ICE/BW_reflect_AMR.ups
M StandAlone/inputs/ICE/advect2matAMR.ups
M StandAlone/inputs/ICE/advectScalarAMR.ups
M StandAlone/inputs/ICE/explosion.ups
M StandAlone/inputs/ICE/hotBlob_AMR.ups
M StandAlone/inputs/ICE/impAdvectAMR.ups
M StandAlone/inputs/ICE/impHotBlobAMR.ups
M StandAlone/inputs/ICE/impVorticesAMR.ups
M StandAlone/inputs/ICE/programBurnAMR.ups
M StandAlone/inputs/ICE/riemann2D_AMR.ups
M StandAlone/inputs/ICE/riemann_AMR.ups
M StandAlone/inputs/IS/ArchesHeatUpExplosion/Explode_IS.ups
M StandAlone/inputs/IS/ArchesHeatUpExplosion/HTContainer_arches_mpmice.ups
M StandAlone/inputs/IS/ArchesHeatUpExplosion/HTContainer_heatup.ups
M StandAlone/inputs/IS/ArchesHeatUpExplosion/JP8_fire.ups
M StandAlone/inputs/IS/explodingContainers_AMR.ups
M StandAlone/inputs/IS/hollow_AMR.ups
M StandAlone/inputs/IS/solid_AMR.ups
M StandAlone/inputs/MPM/advect_2L_3D_edges.ups
M StandAlone/inputs/MPM/advect_2L_3D_slabs.ups
M StandAlone/inputs/MPM/advect_3L_1D.ups
M StandAlone/inputs/MPM/advect_3L_3D.ups
M StandAlone/inputs/MPM/disks.ups
M StandAlone/inputs/MPM/riemannMPM_ML.ups
M StandAlone/inputs/MPMICE/advect_2L_MI.ups
M StandAlone/inputs/MPMICE/explode2D_amr.ups
M StandAlone/inputs/Models/scalarJet_AMR.ups
M StandAlone/inputs/Scaling/ranger/large+.ups
M StandAlone/inputs/Scaling/ranger/large.ups
M StandAlone/inputs/Scaling/ranger/med+.ups
M StandAlone/inputs/Scaling/ranger/med.ups
M StandAlone/inputs/Scaling/ranger/small.ups
M StandAlone/inputs/UCF/LBwoRegrid.ups
M StandAlone/inputs/UCF/Switcher/ex4_phase2.ups
M StandAlone/inputs/UCF/Switcher/ex4_phases1_3.ups
M StandAlone/inputs/UCF/Switcher/switchExample4.ups
M StandAlone/inputs/Wasatch/BasicScalarTransportEq_2L.ups
- Changed the way AMR is turned on. Instead of a standalone <doAMR> tag, I added
doAMR to the <Grid> tag. I'm not quite sure why we had <doAMR> in the first place,
as either associating it with the <Grid> (like I have) or just using the <AMR>
section itself seems to make more sense. Thoughts?
- Untabified, indented some of these files too. Use "diff -w" on them.
M StandAlone/inputs/UPS_SPEC/ups_spec.xml
- Added a BOOLEAN data type for data in the UPS file (in addition to DOUBLE, STRING, VECTOR, etc).
When fully implemented, this can help with type safety and validating UPS files as they are
parsed.
- Removed <doAMR> and added doAMR="true" to the <Grid>.
- Only allow PIDX and UDA as possible DataArchive formats (no reason to allow all permutations
of capitalization).
- walltimeStart and walltimeIntervalHorus are integers (as used in the code), so specify them as such.
- added <Grid saveToDisk="true">. But not fully implemented yet.
M StandAlone/sus.cc
- Can't run AMR and reduce_uda at the same time.
- Parse the new "doAMR" from .ups correctly.
M StandAlone/slb.cc
M StandAlone/tools/compare_mms/compare_mms.cc
M StandAlone/tools/graphview/GV_TaskGraph.cc
M StandAlone/tools/pfs/pfs.cc
M StandAlone/tools/pfs/pfs2.cc
M StandAlone/tools/pfs/rawToUniqueGrains.cc
- Make code more readable, follow a few more coding standards.
484 lines of code changed in 16 files:
Follwing Dav's cleanup/standards work while under the hood studying a few things.
- White space, coding standards, indentation, remove tabs.
- Line up some variables to make them easier to read.
- Use of 80+ columns of text (we decided to allow this 10 years ago) and it makes reading longer lines of code on the screen easier.
- Use {} for if/else clauses even if they are only one line long.
- Please put "else" and "else if" on a new line. The added white space makes following the branching much easier.
ALSO:
- remove instances of "using namespace::std" when found.
- nullptr checks
241 lines of code changed in 5 files:
Continuation of commit r56249 - fixes to get the Mac (pedantic compiler) back to working.
Forcing the comparison of pointers to nullptr instead of 0 to help with type safety.
A few cosmetic fixes including some of: Using 80+ columns, coding standards, if{}, indentation.
M CCA/Components/MPM/ReactionDiffusion/DiffusionModels/NonLinearDiff1.cc
M CCA/Components/Wasatch/ReductionHelper.cc
M CCA/Components/Wasatch/Properties.cc
M CCA/Components/Wasatch/FieldClippingTools.h
M CCA/Components/Wasatch/Wasatch.cc
M CCA/Components/Wasatch/ParseTools.cc
M CCA/Components/Wasatch/Expressions/EmbeddedGeometry/EmbeddedGeometryHelper.cc
M CCA/Components/Wasatch/WasatchParticlesHelper.cc
M CCA/Components/DataArchiver/DataArchiver.cc
M CCA/Components/Schedulers/DetailedTasks.cc
M CCA/Components/Schedulers/SchedulerCommon.cc
M Core/Grid/Grid.cc
M Core/DataArchive/DataArchive.cc
M StandAlone/tools/pfs/rawToUniqueGrains.cc
M StandAlone/tools/pfs/pfs.cc
M StandAlone/tools/pfs/pfs2.cc
M StandAlone/tools/fsspeed/fsspeed.cc
M StandAlone/tools/graphview/GV_TaskGraph.cc
M StandAlone/tools/compare_mms/compare_mms.cc
M StandAlone/slb.cc
154 lines of code changed in 20 files:
Continuation of previous commits to fix the type safety issue (compare to nullptr instead of 0) - Wasatch commits.
- Use {} for if statements (even 1 liners).
- Use fully qualified paths for #includes.
M Wasatch/Expressions/BasicExprBuilder.cc
M Wasatch/Transport/MomentTransportEquation.cc
M Wasatch/Transport/ParseEquation.cc
M Wasatch/Transport/ParticleMomentumEquation.cc
M Wasatch/Transport/ScalarTransportEquation.cc
M Wasatch/Transport/TotalInternalEnergyTransportEquation.cc
M Wasatch/WasatchParticlesHelper.cc
53 lines of code changed in 7 files:
Continuation of commit r56249 - getting into the Core and the UCF now.
Mostly cosmetic changes - removing the actual hack (see Handle.h below) to
allow for better type safety using c++11 nullptr.
These changes have passed the local RT on Baja.
- The biggest update in this commit (the update to remove the c++11 warning hack) is that you will
no longer be able to compare a ProblemSpecP to 0 (you will need to compare to 'nullptr').
- White space, coding standards, indentation, remove tabs.
- Line up some variables to make them easier to read.
- Use of 80+ columns of text (we decided to allow this 10 years ago) and it makes reading longer lines of code on the screen easier.
- Use {} for if/else clauses even if they are only one line long.
- Please put "else" and "else if" on a new line. The added white space makes following the branching much easier.
M CCA/Components/Arches/BoundaryConditions/BoundaryFunctorHelper.cc
M CCA/Components/LoadBalancers/DynamicLoadBalancer.cc
M CCA/Components/LoadBalancers/LoadBalancerCommon.cc
M CCA/Components/LoadBalancers/ParticleLoadBalancer.cc
M CCA/Components/Schedulers/DynamicMPIScheduler.cc
M CCA/Components/Schedulers/MPIScheduler.cc
M CCA/Components/Schedulers/UnifiedScheduler.cc
M CCA/Ports/PIDXOutputContext.cc
M Core/GeometryPiece/GeometryPieceFactory.cc
M Core/Grid/BoundaryConditions/BCDataArray.cc
M Core/Grid/BoundaryConditions/BCDataArray.h
- Pass const strings as references instead of copying.
M Core/Grid/BoundaryConditions/BCUtils.cc
M Core/Grid/BoundaryConditions/BoundCondReader.cc
M Core/Grid/Level.h
M Core/Grid/Level.cc
- Pass const params as const.
- Removed m_patches variables as it isn't used anywhere.
- Very few real changes in this file, use diff -w.
M Core/Grid/Patch.h
M Core/Grid/Patch.cc
- Place .h one line functions on one line as it makes the viewing of the Class spec easier
(and this is the main purpose of the .h file.)
- Line up vars/ for easier reading.
M Core/Grid/Task.cc
M Core/Grid/Variables/ComputeSet.h
- Place .h one line functions on one line as it makes the viewing of the Class spec easier
(and this is the main purpose of the .h file.)
M Core/Grid/Variables/ParticleVariable.h
M Core/Grid/Variables/ParticleVariable_special.cc
M Core/Grid/Variables/Variable.cc
- Fix end comment on readPIDX()
M Core/Util/Handle.h
- Here is the hack that is being removed... The "==" operator was overloaded in order
to allow for comparison of pointers to 0. When this is removed, then (previous to these
commits) you would be spammed by warnings about ambiguous "==" operator. By removing this
operator and forcing the comparison to nullptr (as of c++11), type safety is increased.
998 lines of code changed in 24 files:
Continuation of commit r56249 - this time for some various files.
Mostly cosmetic changes, and preparing for removing a hacked out warning when we moved to C++ 11.
These changes have passed the local RT on Baja.
- The biggest update in this commit (the update to remove the c++11 warning hack) is that you will
no longer be able to compare a ProblemSpecP to 0 (you will need to compare to 'nullptr').
- White space, coding standards, indentation, remove tabs.
- Line up some variables to make them easier to read.
- Use of 80+ columns of text (we decided to allow this 10 years ago) and it makes reading longer lines of code on the screen easier.
- Use {} for if/else clauses even if they are only one line long.
- Please put "else" and "else if" on a new line. The added white space makes following the branching much easier.
M CCA/Components/DataArchiver/DataArchiver.h
M CCA/Components/Parent/Switcher.cc
- Remove the outputPS() function as it appears to be dead code (was commented out).
M CCA/Components/Parent/Switcher.h
M CCA/Components/ProblemSpecification/ProblemSpecReader.cc
- More verbose error message.
M CCA/Components/ReduceUda/UdaReducer.cc
M CCA/Components/Solvers/AMR/AMRSolver.cc
M CCA/Components/Solvers/CGSolver.cc
M CCA/Components/Solvers/HypreSolver.cc
M Core/ProblemSpec/ProblemSpec.cc
M R_Tester/helpers/runSusTests.py
M R_Tester/toplevel/generateGoldStandards.py
- Remove the SCI_SIGNALMODE env flag that was being passed to the tester. As far as I can tell, SCI_SIGNALMODE
was removed from Uintah a long time ago when we cut out a lot of SCIRun stuff. Also, in a bizarre twist,
adding "-x SCI_SIGNALMODE" (or in fact, any "-x " var that is over 8 characters long) causes the answers
to a few tests (eg: methane_fire_8patch_petscrad) to fail exact comparison (at e-15 or so).
331 lines of code changed in 11 files:
Continuation of commit r56249 - this time for MPM, Models, OnTheFlyAnalysis.
Cosmetic changes and preparing for removing a hacked out warning when we moved to C++ 11.
These changes have passed the local RT on Baja.
- The biggest update in this commit (the update to remove the c++11 warning hack) is that you will
no longer be able to compare a ProblemSpecP to 0 (you will need to compare to 'nullptr').
- White space, coding standards, indentation, remove tabs, align variablesa.
- Line up some variables to make them easier to read.
- Use of 80+ columns of text (we decided to allow this 10 years ago) and it makes reading longer lines of code on the screen easier.
- Use {} for if/else clauses even if they are only one line long.
- Please put "else" and "else if" on a new line. The added white space makes following the branching much easier.
M CCA/Components/FVM/ElectrostaticSolve.cc
M CCA/Components/FVM/FVMMaterial.cc
M CCA/Components/MPM/AMRMPM.cc
M CCA/Components/MPM/ConstitutiveModel/MPMMaterial.cc
M CCA/Components/MPM/Contact/ContactFactory.cc
M CCA/Components/MPM/ImpMPM.cc
M CCA/Components/MPM/MPMCommon.cc
M CCA/Components/MPM/MPMFlags.cc
M CCA/Components/MPM/PhysicalBC/LoadCurve.h
M CCA/Components/MPM/PhysicalBC/MPMPhysicalBCFactory.cc
M CCA/Components/MPM/PhysicalBC/PolynomialData.cc
M CCA/Components/MPM/SerialMPM.cc
M CCA/Components/MPM/ShellMPM.cc
M CCA/Components/MPM/ThermalContact/ThermalContactFactory.cc
M CCA/Components/Models/FluidsBased/AdiabaticTable.cc
M CCA/Components/Models/FluidsBased/ArchesTable.cc
M CCA/Components/Models/FluidsBased/Mixing.cc
M CCA/Components/Models/FluidsBased/NonAdiabaticTable.cc
M CCA/Components/Models/FluidsBased/PassiveScalar.cc
M CCA/Components/Models/FluidsBased/SimpleRxn.cc
M CCA/Components/Models/FluidsBased/TableFactory.cc
M CCA/Components/Models/FluidsBased/flameSheet_rxn.cc
M CCA/Components/Models/HEChem/DDT0.cc
M CCA/Components/Models/HEChem/DDT1.cc
M CCA/Components/Models/HEChem/JWLpp.cc
M CCA/Components/Models/HEChem/MesoBurn.cc
M CCA/Components/Models/HEChem/Simple_Burn.cc
M CCA/Components/Models/HEChem/Steady_Burn.cc
M CCA/Components/Models/HEChem/Unsteady_Burn.cc
M CCA/Components/Models/HEChem/ZeroOrder.cc
M CCA/Components/Models/ModelFactory.cc
M CCA/Components/Models/Radiation/RMCRT/Radiometer.cc
M CCA/Components/Models/SolidReactionModel/SolidReactionModel.cc
M CCA/Components/OnTheFlyAnalysis/1stLawThermo.cc
M CCA/Components/OnTheFlyAnalysis/AnalysisModuleFactory.cc
M CCA/Components/OnTheFlyAnalysis/MinMax.cc
M CCA/Components/OnTheFlyAnalysis/containerExtract.cc
M CCA/Components/OnTheFlyAnalysis/lineExtract.cc
M CCA/Components/OnTheFlyAnalysis/momentumAnalysis.cc
M CCA/Components/OnTheFlyAnalysis/particleExtract.cc
M CCA/Components/OnTheFlyAnalysis/planeExtract.cc
M CCA/Components/OnTheFlyAnalysis/statistics.cc
383 lines of code changed in 42 files:
Continuation of commit r56249 - this time for ICE component.
Mostly cosmetic changes, and preparing for removing a hacked out warning when we moved to C++ 11.
These changes have passed the local RT on Baja.
- The biggest update in this commit (the update to remove the c++11 warning hack) is that you will
no longer be able to compare a ProblemSpecP to 0 (you will need to compare to 'nullptr').
- White space, coding standards, indentation, remove tabs.
- Line up some variables to make them easier to read.
- Use of 80+ columns of text (we decided to allow this 10 years ago) and it makes reading longer lines of code on the screen easier.
- Use {} for if/else clauses even if they are only one line long.
- Please put "else" and "else if" on a new line. The added white space makes following the branching much easier.
M CCA/Components/ICE/AMRICE.cc
M CCA/Components/ICE/BoundaryCond.cc
M CCA/Components/ICE/CustomBCs/LODI2.cc
M CCA/Components/ICE/CustomBCs/MMS_BCs.cc
M CCA/Components/ICE/CustomBCs/inletVelocity.cc
M CCA/Components/ICE/CustomBCs/microSlipBCs.cc
M CCA/Components/ICE/CustomBCs/sine.cc
M CCA/Components/ICE/ICE.cc
M CCA/Components/ICE/ICEMaterial.cc
M CCA/Components/ICE/TurbulenceModel/Turbulence.cc
M CCA/Components/ICE/customInitialize.cc
- See above.
M Core/GeometryPiece/GeometryPieceFactory.cc
- Alphabetize #includes, align vars, white space, formatting.
74 lines of code changed in 12 files:
Mostly cosmetic changes, and preparing for removing a hacked out warning when we moved to C++ 11.
These changes have passed the local RT on Baja.
- The biggest update in this commit (the update to remove the c++11 warning hack) is that you will
no longer be able to compare a ProblemSpecP to 0 (you will need to compare to 'nullptr').
- White space, coding standards, indentation, remove tabs.
- Line up some variables to make them easier to read.
- Use of 80+ columns of text (we decided to allow this 10 years ago) and it makes reading longer lines of code on the screen easier.
- Please put "else" and "else if" on a new line. The added white space makes following the branching much easier.
- Use {} for if/else clauses even if they are only one line long.
- Swatted some evil endls. (Use "\n")
- Alphabetize #includes and remove some unneeded ones.
- Add in Copyright notice to some files that were missing it.
M CCA/Components/Arches/Arches.cc
M CCA/Components/Arches/ArchesLabel.cc
- Fix code so that "found_role = true" is not repeated a hundred times... As I tell my CS 1000 students, if it
happens in every branch of the 'if' statement, it should be moved out of all of them.
M CCA/Components/Arches/BoundaryCond_new.cc
M CCA/Components/Arches/BoundaryCondition.cc
M CCA/Components/Arches/BoundaryConditions/BoundaryConditionFactory.cc
M CCA/Components/Arches/BoundaryConditions/BoundaryFunctors.h
M CCA/Components/Arches/BoundaryConditions/HandOff.h
M CCA/Components/Arches/CQMOM.cc
M CCA/Components/Arches/ChemMix/ColdFlow.cc
M CCA/Components/Arches/ChemMix/MixingRxnModel.cc
M CCA/Components/Arches/ChemMix/TableLookup.cc
M CCA/Components/Arches/CoalModels/CharOxidationSmith.cc
M CCA/Components/Arches/CoalModels/Deposition.cc
M CCA/Components/Arches/CoalModels/EnthalpyShaddix.cc
M CCA/Components/Arches/CoalModels/HeatTransfer.cc
M CCA/Components/Arches/CoalModels/KobayashiSarofimDevol.cc
M CCA/Components/Arches/CoalModels/SimpleHeatTransfer.cc
M CCA/Components/Arches/DQMOM.cc
M CCA/Components/Arches/ExplicitSolver.cc
M CCA/Components/Arches/IntrusionBC.cc
M CCA/Components/Arches/IntrusionBC.h
M CCA/Components/Arches/LagrangianParticles/LagrangianParticleFactory.cc
M CCA/Components/Arches/MomentumSolver.cc
M CCA/Components/Arches/MomentumSolver.h
M CCA/Components/Arches/ParticleModels/CQMOMSourceWrapper.cc
M CCA/Components/Arches/ParticleModels/ParticleModelFactory.cc
M CCA/Components/Arches/ParticleModels/ParticleTools.h
M CCA/Components/Arches/ParticleModels/ShaddixEnthalpy.h
M CCA/Components/Arches/PressureSolverV2.cc
M CCA/Components/Arches/PropertyModels/RadProperties.cc
M CCA/Components/Arches/PropertyModelsV2/DensityPredictor.cc
M CCA/Components/Arches/PropertyModelsV2/PropertyModelFactoryV2.cc
M CCA/Components/Arches/PropertyModelsV2/VariableStats.cc
M CCA/Components/Arches/Radiation/DORadiationModel.cc
M CCA/Components/Arches/Radiation/RadPropertyCalculator.cc
M CCA/Components/Arches/Radiation/RadPropertyCalculator.h
M CCA/Components/Arches/SourceTerms/DORadiation.cc
M CCA/Components/Arches/SourceTerms/IntrusionInlet.h
M CCA/Components/Arches/SourceTerms/PCTransport.cc
M CCA/Components/Arches/SourceTerms/SourceTermFactory.cc
M CCA/Components/Arches/Transport/ComputePsi.h
M CCA/Components/Arches/Transport/KFEUpdate.h
M CCA/Components/Arches/Transport/KMomentum.h
M CCA/Components/Arches/Transport/KScalarRHS.h
M CCA/Components/Arches/Transport/TransportFactory.cc
M CCA/Components/Arches/TransportEqns/CQMOMEqn.cc
M CCA/Components/Arches/TransportEqns/CQMOM_Convection.cc
M CCA/Components/Arches/TransportEqns/DQMOMEqn.cc
M CCA/Components/Arches/TransportEqns/DQMOMEqnFactory.cc
M CCA/Components/Arches/TransportEqns/ScalarEqn.cc
M CCA/Components/Arches/UPSHelper.h
M CCA/Components/Arches/Utility/InitializeFactory.cc
M CCA/Components/Arches/Utility/TaskAlgebra.h
M CCA/Components/Arches/Utility/UtilityFactory.cc
M CCA/Components/Arches/WBCHelper.cc
M CCA/Components/Arches/WallHTModels/WallModelDriver.cc
- See above for list of updates.
1050 lines of code changed in 62 files:
printMinMax<Vector>
don't print out the cmin and cmax location if they are nullptr
5 lines of code changed in 1 file:
Update NSCBC hash.
1 lines of code changed in 1 file:
update NSCBC hash
1 lines of code changed in 1 file:
update Wasatch NSCBC in light of changes in the NSCBC library.
2 lines of code changed in 1 file:
Update old parallel copy uda scripts.
0 lines of code changed in 4 files:
Fixed 3x3 matrix inversion for char oxidation model. Shouldn't change ansers.
59 lines of code changed in 2 files:
Remove the weight from the source factory. This wasn't used anywhere and
caused an RT problem.
'
0 lines of code changed in 1 file:
In GeometryPieceFactory, comment out some unused datatypes to eliminate compiler
warnings. In the TriGeometryPiece, comment out the construction of the
vector of boxes. These don't seem to be used and are a memory pig for large
triangulated surfaces.
12 lines of code changed in 3 files:
Whitespace etc...
54 lines of code changed in 2 files:
Forgot to commit this in previous commit that ceased reading in geometry objects
on restart.
1 lines of code changed in 1 file:
Continuing the string of unintended consequences. Don't read in geometry
on restart for ICE or models.
72 lines of code changed in 43 files:
Allow a source term to produce multiple labels, which may correspond to
multiple sources. This changes, somewhat, a fundamental assumption in
the original design of the source term factory/base in that it would
only produce one output variable. As such, it has some *tiny* flavor of
hackiness but should, for the most part, be just fine for this
soon-to-be-outdated code.
With this new feature, the Brown Soot model has been condensed into a
single source term file, producing four different sources.
798 lines of code changed in 22 files:
Fix race condition in OnDemandDataWarehouse::queryPSetDB.
Determine "best_volume" in a portable way.
13 lines of code changed in 1 file:
Added option to continue the tarring process if a previous attempt failed.
Polish.
68 lines of code changed in 1 file:
Get the ICEMaterial in tune with the MPMMaterial for restarts.
22 lines of code changed in 3 files:
Have problemSetup figure out if a simulation is a restart or not, and pass that
information to the MPMMaterial constructor which can then choose to skip reading
the geometry data, which, for a triangulated surface, can be very large and
slow.
50 lines of code changed in 9 files:
Fixing a few bugs per our visit with David.
157 lines of code changed in 3 files:
Force shell to be bash for portability.
1 lines of code changed in 1 file:
Version 2.0
- All directories that are tarred are also compressed using either gzip or pigz (parallel gzip).
With compression the timesteps directories are ~%35 smaller.
- Added ability to extract compressed timesteps in parallel.
- new command line options:
Options:
-np: [int] Number of processores used.
-allTimesteps: [y/n] operate on all directories in uda? If "n" then a vi window will open allowing you to edit the timesteps
-create blank create new archives
-extract blank extract timestep archieves
-uda [dir name] uda name
-help: Display this option summary
147 lines of code changed in 2 files:
Fix the update of particle volume and size for cases where particle mass is
changing due to reaction.
5 lines of code changed in 1 file:
Additional cleanup of the monica options.
0 lines of code changed in 1 file:
Fix typo in comment
3 lines of code changed in 1 file:
Start the process of extracting the damage model from UCNH. This commit replicates most of damage code in
UCNH. This has not been tested and is still under heavy constuction.
All of the RT tests should pass.
809 lines of code changed in 10 files:
added getParent() which returns the parent of the node. Needed for next commit.
19 lines of code changed in 2 files:
global: removed EOL blanks
updateFailedParticlesAndModifyStress() updateDamageAndModifyStress()
- added horizontal and vertical spaces.
- Added {}
- align
347 lines of code changed in 1 file:
formatting:
- start on column 2 not 3.
- added {} to conditional tree.
43 lines of code changed in 2 files:
Deleted redundant constructor for UCNH. Now using the general purpose constructor that passes in
plasticiy and damage switches.
Added {} to decision tree in ConstitutiveModelFactory.
105 lines of code changed in 3 files:
updateFailedParticlesAndModifyStress()
reverted previous delete.
+ pLocalized_new = pLocalized;
+ pTimeOfLoc_new = pTimeOfLoc;
* this should fix the last failing RT test.
2 lines of code changed in 1 file:
initialize d_damageType = none
d_useDamage = false.
69 lines of code changed in 2 files:
Damage model cleanup before it's extracted an put in damageModelFactory.
UCNH:
- some formatting, added dividers
- Brittle damage is no longer a type of errosion, it's now a type of damage.
- damage models are now specified using:
<damage type=X> X = Threshold or Brittle
stuff
</damage>
- initialize pTimeOfLoc_new[idx] = pTimeOfLoc[idx]; before calling
updateDamageAndModifyStress() and updateFailedParticlesAndModifyStress()
Updated ups files
# this commit should not change the answers for ups files that utilize damage models
274 lines of code changed in 2 files:
UPS_spec code:
Allow the developer to specify
"OPTIONAL DOUBLE 'positive' " instead of
"OPTIONAL DOUBLE 'positive'"
Warn developer in exception to remove single quotes in needs_applies_to values.
9 lines of code changed in 1 file:
MPM.py
-- added DAMAGETESTS array. Tests that exercise the damage models
disk_complex.ups
- removed confusing weed, <failure_by_stress> tag. It's not used by CM:cnh_damage, aka UCNH.
*.ups
- adjusted max_timesteps so they can be run in a short amount of time.
15 lines of code changed in 1 file: