November 2017 Commit Log

Number of Commits:
121
Number of Active Developers:
11
allen 2017-11-30 17:42 Rev.: 57381

fixed typo

2 lines of code changed in 2 files:

allen 2017-11-30 17:38 Rev.: 57380

clean up of the switching to have a single switch block and cleanup of the setup ordering.

99 lines of code changed in 6 files:

harman 2017-11-30 11:44 Rev.: 57378

Moved common code to Module.cc/h

Cleaned out #includes

Initialize global class variables in the header file.

removed EOL spaces

303 lines of code changed in 13 files:

allen 2017-11-29 17:50 Rev.: 57376

addition work to move the time step and sim time into teh data warehouse. Also more encapulation into the App common

308 lines of code changed in 9 files:

harman 2017-11-29 16:55 Rev.: 57375

Added missing include. Fixes clang-3.9 compilation error.

1 lines of code changed in 1 file:

ahumphrey 2017-11-29 14:29 Rev.: 57373

More cleanup and DebugStream guards.

7 lines of code changed in 2 files:

allen 2017-11-29 14:14 Rev.: 57372

added code to return nullptr

5 lines of code changed in 1 file:

allen 2017-11-29 14:13 Rev.: 57371

removed debug code and replace var

11 lines of code changed in 1 file:

ahumphrey 2017-11-29 13:55 Rev.: 57370

Guard the DataArchiver DebugStream (check if dbg.active()). This is causing issues when not active on mira. DebugStreams need to go away in favor of much simpler Dout, as DebugStreams unnecessarily inherit from the standard library (std::ostream) and are unduley compicated for basic debug output.

Also cleaned up poor whitespace, linebreaks and indentation, other formatting. Seems like someone went through the infrastructure with a faulty code formatter previously...

265 lines of code changed in 8 files:

jas 2017-11-29 12:39 Rev.: 57369

Fixes for static build when --enable-all-components. Remove the PhaseField component from --enable-all-components until duplicate symbols are resolved for the static build.

17 lines of code changed in 7 files:

ahumphrey 2017-11-28 18:04 Rev.: 57368

Missed this on the last commit. Need this for static builds with now ApplicationCommon

1 lines of code changed in 1 file:

jthornoc 2017-11-28 17:55 Rev.: 57367

Throw and error if momentum is on but pressure solver parameters are not
specified. Fixed the AlmgrenMMS prob. with BCs to run with pressure
solver.

15 lines of code changed in 5 files:

jthornoc 2017-11-28 17:55 Rev.: 57366

* Some naming convention updates
* Add property evaluation to the cold flow properties in the initialization
* Updated a bunch of input files to now use state properties

62 lines of code changed in 15 files:

jthornoc 2017-11-28 17:55 Rev.: 57365

Parse the density values from the StateProperty spec rather than
requiring that the user re-enter it.

123 lines of code changed in 6 files:

jthornoc 2017-11-28 17:55 Rev.: 57364

Deleting unused class.
Reverting ColdFlowProps to its original state.
Other minor cleanup.

237 lines of code changed in 20 files:

jthornoc 2017-11-28 17:55 Rev.: 57363

Fixing a typo.

387 lines of code changed in 6 files:

jthornoc 2017-11-28 17:55 Rev.: 57362

* Added a equation class to the equation groups to help manage the different scalar types (mixture fraction, DQMOM, etc…)
* Minor spacing, tabs, etc…
* Added an include in Endian.h as I had a couple compilers not being able to identify the IntVector type.

389 lines of code changed in 6 files:

jthornoc 2017-11-28 17:55 Rev.: 57361

Removed unused label.

0 lines of code changed in 2 files:

ahumphrey 2017-11-28 17:54 Rev.: 57360

Fix case mistake. Mostly working static builds now.

1 lines of code changed in 1 file:

harman 2017-11-28 15:55 Rev.: 57359

Common class for PostProcessing

0 lines of code changed in 2 files:

harman 2017-11-28 15:48 Rev.: 57358

Global:
- Renamed the component and variables associated with reduceUda -> PostProcessUda

PostProcessUda.cc/h:
- cleaned out testing code
- added a common class

2703 lines of code changed in 40 files:

ahumphrey 2017-11-28 14:31 Rev.: 57357

Only compile PapiInitializationError.cc when PAPI enabled.

0 lines of code changed in 2 files:

mike.hansen 2017-11-28 13:16 Rev.: 57356

- revert a subset of multicomponent BC changes

36 lines of code changed in 3 files:

ahumphrey 2017-11-27 20:40 Rev.: 57353

Add 1 and 2 proc GPU tests for UnifiedScheduler test component. Moved input file to inputs/Examples directory.

18 lines of code changed in 1 file:

ahumphrey 2017-11-27 20:15 Rev.: 57352

Remove PoissonGPU1 example component.

1 lines of code changed in 6 files:

mike.hansen 2017-11-27 14:48 Rev.: 57351

- remove forgotten test code in ScalarTransportEquation

0 lines of code changed in 1 file:

harman 2017-11-27 13:33 Rev.: 57350

Consolidated duplicate code.

0 lines of code changed in 4 files:

allen 2017-11-27 12:18 Rev.: 57348

added additonal comments

7 lines of code changed in 1 file:

allen 2017-11-27 12:13 Rev.: 57347

added John's script for running the buildbot test

18 lines of code changed in 1 file:

harman 2017-11-27 11:38 Rev.: 57346

Plot high water usage before exiting. This hasn't been working since 09/07/17


6 lines of code changed in 1 file:

allen 2017-11-27 10:30 Rev.: 57345

changed sharedState to m_sharedState

13 lines of code changed in 3 files:

harman 2017-11-27 10:06 Rev.: 57344

Added Allen S. to the email list for the gpu_rt.

1 lines of code changed in 1 file:

mike.hansen 2017-11-26 16:34 Rev.: 57343

- fix pure fluid compressible with PoKiTT build...

0 lines of code changed in 2 files:

mike.hansen 2017-11-26 13:52 Rev.: 57341

- nonreflecting BCs for multi-component, chemically-reacting, acoustically-compressible flows in Wasatch
- (also change heat capacity from TagNames used in coal model)

1638 lines of code changed in 27 files:

allen 2017-11-24 15:37 Rev.: 57339

removed the delta T label from the shared state and began removing the shared state where possible

851 lines of code changed in 188 files:

allen 2017-11-23 11:05 Rev.: 57338

drop the reference

2 lines of code changed in 1 file:

allen 2017-11-22 22:13 Rev.: 57336

Added check for modelmaker

3 lines of code changed in 1 file:

allen 2017-11-22 22:05 Rev.: 57335

Fixed so the model maker is passed down correctly

62 lines of code changed in 9 files:

allen 2017-11-22 21:12 Rev.: 57334

additional changes related to the Application Common

395 lines of code changed in 48 files:

derekhar 2017-11-22 15:10 Rev.: 57332

Added support for 1-sided ghosts and invoking their use in Arches-sweeps. This results in a 12-25% speed-up of the sweeping algorithm, depending on scale.

63 lines of code changed in 10 files:

allen 2017-11-22 14:41 Rev.: 57331

fixed setting the inital timestep and remvoed comments

4 lines of code changed in 1 file:

jholmen 2017-11-22 12:01 Rev.: 57330

* Removed unnecessary code paths that are no longer needed due to separating RMCRT:CPU and RMCRT:Kokkos.

4 lines of code changed in 1 file:

jholmen 2017-11-22 10:35 Rev.: 57329

* Removed Kokkos-based RMCRT implementations from Ray.cc.
* Added CCA/Components/Models/Radiation/RMCRT/RayKokkos.cc.

This commit moves Kokkos-based RMCRT implementations into their own file.

Note, Kokkos must be invoked using --with-kokkos=DIR to manage which version is picked up.

3769 lines of code changed in 4 files:

jholmen 2017-11-21 23:41 Rev.: 57328

* Added build system support for Kokkos.
* Added /src/include/sci_defs/kokkos_testdefs.h.in.

This commit allows --with-kokkos=DIR to be used to point to a Kokkos installation instead of CXXFLAGS and LDFLAGS.

Note, files using #define UINTAH_ENABLE_KOKKOS must now add #include <sci_defs/kokkos_defs.h> to manage this macro.

97 lines of code changed in 45 files:

allen 2017-11-21 20:58 Rev.: 57327

fixed updating of the sim time

14 lines of code changed in 1 file:

allen 2017-11-21 17:53 Rev.: 57326

consolation of code in the controller and cleanup of app common

91 lines of code changed in 3 files:

harman 2017-11-21 16:53 Rev.: 57324

- added support for CCVariable<floats>
- filled in calculation of spatial averages
- cleanup

* spatial averaging working

153 lines of code changed in 2 files:

allen 2017-11-21 15:47 Rev.: 57323

missed a few name changes

10 lines of code changed in 9 files:

allen 2017-11-21 15:40 Rev.: 57322

update to move to a application common class and remove the shared state

5206 lines of code changed in 460 files:

allen 2017-11-21 15:38 Rev.: 57321

updates to the new app common class

692 lines of code changed in 2 files:

harman 2017-11-21 11:58 Rev.: 57320

Added post processing module to compute spatial/temporal averages for variables saved in a uda.

Heavy construction zone.

768 lines of code changed in 5 files:

harman 2017-11-20 18:24 Rev.: 57319

Added option:
-deleteOrgTimesteps delete original timesteps directories after they have been tarred.

0 lines of code changed in 4 files:

harman 2017-11-20 15:29 Rev.: 57318

Created a separate namespace to avoid a clash. The clash only showed up on a static build.


5 lines of code changed in 3 files:

harman 2017-11-17 19:04 Rev.: 57312

- Cleaned out dead code.
- Added usage comments
- Added bulletproofing

* It's working.

129 lines of code changed in 10 files:

ahumphrey 2017-11-17 15:44 Rev.: 57311

Update TSAN suppression list

0 lines of code changed in 2 files:

allen 2017-11-17 15:25 Rev.: 57310

added needed / removed unneeded include file

30 lines of code changed in 34 files:

harman 2017-11-17 10:04 Rev.: 57308

The statistics module runs but is not verified. There's more code to cleanup.


38 lines of code changed in 5 files:

harman 2017-11-16 16:09 Rev.: 57306

Changed Dout variable name to avoid a clash that only appears when sus exits.


3 lines of code changed in 1 file:

harman 2017-11-16 14:19 Rev.: 57305

Heavy construction zone.

Added the foundation for new postProcessUda component.

Added factory machinery for adding uda post processing modules.

Added statistics module, which is a copy of the OnTheFly:: statistics code.

It compiles and that's it.


1796 lines of code changed in 9 files:

allen 2017-11-15 17:30 Rev.: 57303

moved the outputing to the correct location

23 lines of code changed in 1 file:

harman 2017-11-15 16:24 Rev.: 57302

queryGlobals()
- added missing mutex unlock before returning.


1 lines of code changed in 1 file:

harman 2017-11-13 10:05 Rev.: 57295

The buildbot test list now contains all tests.

2 lines of code changed in 1 file:

harman 2017-11-10 18:02 Rev.: 57292

Added regression test designed to exercise the adjust_IO_intervals code.

1 lines of code changed in 1 file:

ohdiazi 2017-11-10 14:55 Rev.: 57288

RT test for kokkos

4 lines of code changed in 1 file:

ohdiazi 2017-11-10 14:55 Rev.: 57287

adding RT test, and fixing ML

30 lines of code changed in 2 files:

ohdiazi 2017-11-08 17:57 Rev.: 57277

Fixing warning and taylorgreen3D arches spec

4 lines of code changed in 1 file:

ohdiazi 2017-11-08 10:57 Rev.: 57276

fixing BC for FX group of eqns

61 lines of code changed in 3 files:

ohdiazi 2017-11-08 10:57 Rev.: 57275

Adding arches_spec. Fixing solver pressure, drhodt, compute density

151 lines of code changed in 9 files:

ohdiazi 2017-11-08 10:57 Rev.: 57274

fixing taylor problem

0 lines of code changed in 2 files:

ohdiazi 2017-11-08 10:57 Rev.: 57273

I added "compute_density_star" in ups with variable density

12 lines of code changed in 1 file:

ohdiazi 2017-11-08 10:57 Rev.: 57271

Fixing ups.

164 lines of code changed in 6 files:

ohdiazi 2017-11-08 10:57 Rev.: 57270

fixing BC in ups files. densty as StateProperties

1 lines of code changed in 1 file:

ohdiazi 2017-11-08 10:57 Rev.: 57268

adding a gropu of task in initialization factory

7 lines of code changed in 1 file:

ohdiazi 2017-11-08 10:57 Rev.: 57265

fixing task to compute phi from rho*phi

54 lines of code changed in 4 files:

ohdiazi 2017-11-08 10:57 Rev.: 57264

taks to compute rho from rho*phi

0 lines of code changed in 2 files:

ohdiazi 2017-11-08 10:57 Rev.: 57263

initialization task for Shunn problems

238 lines of code changed in 7 files:

ohdiazi 2017-11-08 10:57 Rev.: 57262

codl flow task

23 lines of code changed in 3 files:

ohdiazi 2017-11-08 10:57 Rev.: 57260

cold flow files

38 lines of code changed in 2 files:

ohdiazi 2017-11-08 10:57 Rev.: 57259

adding variable density algorithm

106 lines of code changed in 1 file:

ohdiazi 2017-11-08 10:56 Rev.: 57258

tasks to compute: drhodt, density guess and check continuity equation

594 lines of code changed in 8 files:

ohdiazi 2017-11-08 10:56 Rev.: 57257

task to compute phi or ui

301 lines of code changed in 2 files:

ohdiazi 2017-11-08 10:56 Rev.: 57256

task to compute phi or u

112 lines of code changed in 3 files:

ohdiazi 2017-11-08 10:56 Rev.: 57255

fixing extrac cell for add pressure

0 lines of code changed in 2 files:

ohdiazi 2017-11-08 10:56 Rev.: 57254

update rho_phi instead of phi

17 lines of code changed in 1 file:

ohdiazi 2017-11-08 10:56 Rev.: 57253

drhodt in pressure equation

15 lines of code changed in 1 file:

ohdiazi 2017-11-08 10:56 Rev.: 57252

to turn off pressure solver: only for verification

8 lines of code changed in 1 file:

ohdiazi 2017-11-08 10:56 Rev.: 57251

adding rho_phi for variable density

23 lines of code changed in 1 file:

ohdiazi 2017-11-08 10:56 Rev.: 57250

Adding label for velocities

0 lines of code changed in 2 files:

ohdiazi 2017-11-08 10:56 Rev.: 57249

source terms for Shunn Problem 3

608 lines of code changed in 6 files:

ohdiazi 2017-11-08 10:56 Rev.: 57248

updating Shunn problem 1.

15 lines of code changed in 1 file:

harman 2017-11-08 10:47 Rev.: 57247

Now extracting the Task Graph compiliation times for timesteps 0 & 1. Extracting and computing
the average number of solver iterations.

0 lines of code changed in 6 files:

allen 2017-11-07 18:45 Rev.: 57246

added missing header file

5 lines of code changed in 7 files:

guilkey 2017-11-07 17:58 Rev.: 57245

Add IntVector to the variables that have a swapbytes defined. Also added a
comment directing the next person to edit testEndian.h.in to get changes to
Endian.h. Thanks to Dav and Biswajit for their help.

10 lines of code changed in 3 files:

allen 2017-11-07 14:33 Rev.: 57244

updates to puda to handle per patch variables

0 lines of code changed in 2 files:

allen 2017-11-07 13:35 Rev.: 57243

added support for saving per patch data

353 lines of code changed in 17 files:

allen 2017-11-07 13:35 Rev.: 57242

commented out code that can not used yet

11 lines of code changed in 1 file:

allen 2017-11-07 12:02 Rev.: 57241

updates to the Application Common

274 lines of code changed in 2 files:

derekhar 2017-11-07 11:28 Rev.: 57240

sweeps now throws an error when using the dynamicMPI scheduler.

10 lines of code changed in 1 file:

guilkey 2017-11-07 11:12 Rev.: 57239

Goodbye FractureMPM. This hasn't been compiled for a long time, and is just
more and more in the way.

1 lines of code changed in 3 files:

guilkey 2017-11-07 11:07 Rev.: 57238

Cosmetics...

7 lines of code changed in 1 file:

allen 2017-11-06 13:58 Rev.: 57235

commented out used variables

10 lines of code changed in 4 files:

allen 2017-11-06 13:28 Rev.: 57234

commented out unused var to remove warnings

0 lines of code changed in 4 files:

allen 2017-11-06 13:22 Rev.: 57233

cleanup to remove local var and method with the same name

20 lines of code changed in 1 file:

allen 2017-11-06 13:16 Rev.: 57232

commented out unused var to remove warnings

0 lines of code changed in 2 files:

allen 2017-11-06 13:11

removed spurious header file

1 lines of code changed in 4 files:

allen 2017-11-06 12:59 Rev.: 57229

added unsigned to remove warnings

1 lines of code changed in 1 file:

allen 2017-11-06 12:56 Rev.: 57228

removed spurious header file

0 lines of code changed in 1 file:

allen 2017-11-06 12:41 Rev.: 57227

added header file

3 lines of code changed in 1 file:

allen 2017-11-06 12:38

removed spurious header file

2 lines of code changed in 3 files:

allen 2017-11-06 12:38 Rev.: 57224

added unsigned to remove warnings

2 lines of code changed in 1 file:

allen 2017-11-06 12:34

removed spurious header file

1 lines of code changed in 12 files:

allen 2017-11-06 12:34 Rev.: 57221

commented out unused var to remove warning

0 lines of code changed in 2 files:

allen 2017-11-06 12:27

removed spurious header file

0 lines of code changed in 6 files:

allen 2017-11-06 12:00

added unsigned to remove warnings

4 lines of code changed in 4 files:

allen 2017-11-06 11:50

removed spurious header file

0 lines of code changed in 3 files:

allen 2017-11-06 11:49 Rev.: 57213

added unsigned to remove warnings

4 lines of code changed in 1 file:

allen 2017-11-06 11:46

removed spurious header file

0 lines of code changed in 4 files:

allen 2017-11-03 15:14 Rev.: 57207

changed to cout

1 lines of code changed in 1 file:

harman 2017-11-03 14:53 Rev.: 57206

Changes that have been sitting in a build since April.

Added code to handle uda's with hundreds of timesteps. Yes, they do exist....


22 lines of code changed in 2 files:

jsutherland 2017-11-02 09:12 Rev.: 57204

Silence a few compiler warnings.

2 lines of code changed in 5 files:

jsutherland 2017-11-01 20:04 Rev.: 57203

Update SpatialOps to eliminate numerous warnings.

0 lines of code changed in 2 files:

October 2017 »

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