Designed especially for neurobiologists, FluoRender is an interactive tool for multi-channel fluorescence microscopy data visualization and analysis.
Deep brain stimulation
BrainStimulator is a set of networks that are used in SCIRun to perform simulations of brain stimulation such as transcranial direct current stimulation (tDCS) and magnetic transcranial stimulation (TMS).
Developing software tools for science has always been a central vision of the SCI Institute.

SCI Publications

2002


 K.A. Hansen, J.A. Weiss, J.K. Barton. “Recruitment of Tendon Crimp with Applied Tensile Strain,” In Journal of Biomechanical Engineering, Vol. 124, pp. 72--77. 2002.


P.K. Jimack, R. Mahmood, M.A. Walkley, M. Berzins. “A Multilevel Approach for Obtaining Locally Optimal Finite Element Meshes,” In Adv. Eng. Soft., Vol. 33, pp. 403--415. 2002.


C.R. Johnson, S.G. Parker, D. Weinstein, S. Heffernan. “Component-Based Problem Solving Environments for Large-Scale Scientific Computing,” In J. Conc. & Comp.: Prac. & Exper., Vol. 14, pp. 1337--1349. 2002.


S. Joshi, S. Pizer, P.T. Fletcher, P. Yushkevich, A. Thall, J. Marron. “Multiscale Deformable Model Segmentation and Statistical Shape Analysis Using Medial Descriptions,” In IEEE Trans Med Imaging, Vol. 21, No. 5, pp. 538--550. May, 2002.


E.G. Kholmovski, A.A. Samsonov, D.L. Parker. “POCSENSE: POCS-based method for reconstruction from sensitivity-encoded data,” In Proceedings of The 10th Annual Scientific Meeting of The International Society for Magnetic Resonance in Medicine (ISMRM), Honolulu, pp. 194. 2002.


E.G. Kholmovski, A.A. Samsonov, D.L. Parker. “Motion Artifact Reduction Technique for Dual Contrast FSE Imaging,” In Magnetic Resonance Imaging, Vol. 20, No. 6, pp. 455--462. 2002.


R.M. Kirby, G.E. Karniadakis. “Coarse Resolution Turbulence Simulations With Spectral Vanishing Viscosity - Large-Eddy Simulations (SVV-LES),” In J. Fluids Eng., Vol. 124, No. 4, pp. 886-891. 2002.


R.M. Kirby, G.E. Karniadakis. “Coarse Resolution Turbulence Simulations With Spectral Vanishing Viscosity - Large-Eddy Simulations (SVV-LES),” In Journal of Fluids Engineering, Vol. 124, No. 4, pp. 886--891. 2002.


J.M. Kniss, G. Kindlmann, C.D. Hansen. “Multidimensional Transfer Functions for Interactive Volume Rendering,” In IEEE Trans. Vis & Comp. Graph., Vol. 8, No. 3, pp. 270--285. 2002.


J.M. Kniss, C.D. Hansen, M. Grenier, T. Robinson. “Volume Rendering Multivariate Data to Visualize Meteorological Simulations: A Case Study,” In Proceeding of The Joint Eurographics - IEEE TCVG Symposium on Visualization 2002, 2002.


J.M. Kniss, S. Premoze, C.D. Hansen, D. Ebert. “Interactive Translucent Volume Rendering and Procedural Modeling,” In Proceeding of IEEE Visualization 2002, 2002.


I. Lagzi, A.S. Tomlin, T. Turanyi, L. Haszpra, R. Meszaros, M. Berzins. “Modelling Tropospheric Ozone Formation in Hungary Using an Adaptive Gridding Method,” In Proceedings from the EUROTRAC-2 Symposium 2002, Edited by Garmisch-Partenkirchenand P.M. Midgley and M. Reuters, 2002.


I. Lagzi, A.S. Tomlin, T. Turanyi, L. Haszpra, R. Meszaros, M. Berzins. “Modeling Photochemical Air Pollution in Hungary Using an Adaptive Grid Model,” In Air Pollution modeling and Simulation - Proc.2nd International Conference on Air Pollution Modeling and Simulation (APMS'2001), pp. 264--273. april, 2002.
ISBN: 3540425152, 9783540425151


A.E. Lefohn, R.T. Whitaker. “A GPU-Based, Three-Dimensional Level Set Solver with Curvature Flow,” Technical Report, No. UUCS-02-017, University of Utah School of Computing, 2002.


P. Lindstrom, V. Pascucci. “Terrain Simplification Simplified: A General Framework for View-Dependent Out-of-Core Visualization,” In IEEE Transactions on Visualization and Computer Graphics, Vol. 8, No. 3, Note: UCRL-JC-147847, pp. 239--254. July-September, 2002.


L. Linsen, V. Pascucci, M.A. Duchaineau, B. Hamann, K.I. Joy. “Hierarchical Representation of Time-varying Volume Data with 4th-root-of-2 Subdivision and Quadrilinear B-spline Wavelets,” In Proceedings of Tenth Pacific Conference on Computer Graphics and Applications, Beijing, China, Note: UCRL-JC-151063, pp. 346--355. 2002.


Y. Livnat, X. Cavin, C.D. Hansen. “PHASE: Progressive Hardware Assisted IsoSurface Extraction Framework,” SCI Institute Technical Report, No. UUSCI-2002-001, University of Utah, 2002.


A. Lu, J. Taylor, M. Hartner, D. Ebert, C.D. Hansen. “Hardware-Accelerated Interactive Illustrative Stipple Drawing of Polygonal Objects,” In Proceedings of The 7th International Fall Workshop on Vision, Modeling, and Visualization, Erlangen, Germany, pp. 61--68. November, 2002.


A. Lu, C.J. Morris, D. Ebert, P. Rheingans, C.D. Hansen. “Non-Photorealistic Volume Rendering Using Stippling Techniques,” In Proceeding of IEEE Visualization 2002, Boston, MA, Note: Awarded Best Paper at the conference, pp. 211--218. 2002.


E. Luke, C.D. Hansen. “Semotus Visum: A Flexible Remote Visualization Framework,” In Proceeding of IEEE Visualization 2002, Boston, MA, pp. 61--68. 2002.