Computational Models
Simulations of Biological Systems
Multi-Physics Models of Cancer Cells
![]() ![]() Singular Value Decomposition of Genome-Scale mRNA Lengths Distribution Reveals Asymmetry in RNA Gel Electrophoresis Band Broadening, O. Alter, G. H. Golub. In Proceedings of the National Academy of Sciences, Vol. 103, No. 32, Proceedings of the National Academy of Sciences, pp. 11828--11833. July, 2006. DOI: 10.1073/pnas.0604756103 |
![]() ![]() Controlled Support MEG Imaging S. Nagarajan, O. Portniaguine, D. Hwang, C.R. Johnson, K. Sekihara. In NeuroImage, Vol. 15;33, No. 3, pp. 878--885. 2006. |
![]() ![]() ![]() Reconstructing the Pathways of a Cellular System from Genome-Scale Signals by Using Matrix and Tensor Computations, O. Alter, G.H. Golub. In Proceedings of the National Academy of Sciences, Vol. 102, No. 49, Proceedings of the National Academy of Sciences, pp. 17559--17564. November, 2005. DOI: 10.1073/pnas.0509033102 |
![]() ![]() Computational Simulation of Penetrating Trauma in Biological Soft Tissues Using the Material Point Method I. Ionescu, J. Guilkey, M. Berzins, R.M. Kirby, J.A. Weiss. In Proceedings, Medicine Meets Virtual Reality, Vol. 13, Edited by James D Westwood et al., IOS Press, pp. 213--218. 2005. ISBN: 1-58603-498-7 |
![]() ![]() Integrative Analysis of Genome-Scale Data by Using Pseudoinverse Projection Predicts Novel Correlation Between DNA Replication and RNA Transcription, O. Alter, G.H. Golub. In Proceedings of the National Academy of Sciences, Vol. 101, No. 47, Proceedings of the National Academy of Sciences, pp. 16577--16582. November, 2004. DOI: 10.1073/pnas.0406767101 |
![]() ![]() Biomedical Computing and Visualization Software Environments C.R. Johnson, R.S. MacLeod, S.G. Parker, D.M. Weinstein. In Comm. ACM, Vol. 47, No. 11, pp. 64--71. 2004. |
![]() ![]() Generalized Singular Value Decomposition for Comparative Analysis of Genome-Scale Expression Datasets of Two Different Organisms O. Alter, P.O. Brown, D. Botstein. In Proceedings of the National Academy of Sciences, Vol. 100, No. 6, Proceedings of the National Academy of Sciences, pp. 3351--3356. March, 2003. DOI: 10.1073/pnas.0530258100 |